RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	SHMT2	P34897	504 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PTPN5	P54829	565 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	GALNT2	Q10471	571 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	RUNX3	Q13761	415 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	FBXO43	Q4G163	708 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SLC13A3	Q8WWT9	602 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	LDAH	Q9H6V9	325 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	DAPK2	Q9UIK4	370 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PAIP2B	Q9ULR5	123 aa	Known RBP	15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CLEC3A	O75596	197 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CXCR1	P25024	350 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	DNASE1L1	P49184	302 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	OLR1	P78380	273 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ELOA	Q14241	798 aa	Known RBP	15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	IFI44L	Q53G44	452 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TCEAL6	Q6IPX3	200 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TDRP	Q86YL5	185 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SLC35B2	Q8TB61	432 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PAIP1	Q9H074	479 aa	Known RBP	15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ADAMTS10	Q9H324	1103 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PLGRKT	Q9HBL7	147 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PIAS3	Q9Y6X2	628 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CA3	P07451	260 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	TOR1AIP1	Q5JTV8	583 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	CD207	Q9UJ71	328 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	MYOM1	P52179	1685 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	TSC22D2	O75157	780 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	NME6	O75414	186 aa	Predicted RBP	15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	RBMXL2	O75526	392 aa	Known RBP	15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	CNTN5	O94779	1100 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	PAK4	O96013	591 aa	Predicted RBP	15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	CCR10	P46092	362 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	FAM174B	Q3ZCQ3	159 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	SPPL2C	Q8IUH8	684 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	OR2T34	Q8NGX1	318 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	OR2T3	Q8NH03	318 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	MR1	Q95460	341 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	COQ7	Q99807	217 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532		Q9N2J8	555 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	KLRF1	Q9NZS2	232 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	ANKRD26	Q9UPS8	1709 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	KPNA4	O00629	521 aa	Predicted RBP	15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	LEFTY1	O75610	366 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	CYP11A1	P05108	521 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	CFH	P08603	1231 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	PREP	P48147	710 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	SRP54	P61011	504 aa	Known RBP	15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	MAPK11	Q15759	364 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	PRRT3	Q5FWE3	981 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	GPRC6A	Q5T6X5	926 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	IL22RA1	Q8N6P7	574 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	RFK	Q969G6	155 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	COMMD9	Q9P000	198 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	XRN1	Q8IZH2	1706 aa	Known RBP	15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532		A0A1W2PP55	124 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	TAF4	O00268	1085 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	RSL1D1	O76021	490 aa	Known RBP	15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	GJB5	O95377	273 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	BDKRB1	P46663	353 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	CHN2	P52757	468 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	HERVK_113	P63132	956 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	SLC9B1	Q4ZJI4	515 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	C12orf40	Q86WS4	652 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	SMG8	Q8ND04	991 aa	Known RBP	15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	TSPAN14	Q8NG11	270 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	CAMK1G	Q96NX5	476 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	ERVK-6	Q9BXR3	956 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	RNF121	Q9H920	327 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	SNPH	O15079	494 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	CCNB2	O95067	398 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	CTSA	P10619	480 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	ANPEP	P15144	967 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	ELAVL3	Q14576	367 aa	Known RBP	15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	FRG2	Q64ET8	278 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	ZC3H14	Q6PJT7	736 aa	Known RBP	15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	KAT2A	Q92830	837 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	ROPN1L	Q96C74	230 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	FRG2B	Q96QU4	278 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	NELL2	Q99435	816 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	RBM4B	Q9BQ04	359 aa	Known RBP	15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	RBM4	Q9BWF3	364 aa	Known RBP	15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	NOX1	Q9Y5S8	564 aa		15.39	■□□□□ 0.05
NCAPD3-213	ENST00000534532	ZNF217	O75362	1048 aa		15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	GSR	P00390	522 aa		15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	IGFBP5	P24593	272 aa		15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	SMU1	Q2TAY7	513 aa		15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	THOC6	Q86W42	341 aa	Known RBP	15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	ALG2	Q9H553	416 aa		15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	HRASLS2	Q9NWW9	162 aa		15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	MYADML2	A6NDP7	307 aa		15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	KHDRBS3	O75525	346 aa	Known RBP	15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	NR2C1	P13056	603 aa		15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	SP140	Q13342	867 aa		15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	ATG14	Q6ZNE5	492 aa		15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	GPATCH1	Q9BRR8	931 aa	Known RBP	15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	SLC35C2	Q9NQQ7	365 aa		15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	PNPLA3	Q9NST1	481 aa		15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	SPIN1	Q9Y657	262 aa	Predicted RBP	15.38	■□□□□ 0.05
NCAPD3-213	ENST00000534532	SCD	O00767	359 aa		15.38	■□□□□ 0.05

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms