RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, human

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP3-215	ENST00000533946	IKZF3	Q9UKT9	509 aa		9.28	□□□□□ -0.92
SSBP3-215	ENST00000533946	SH2B3	Q9UQQ2	575 aa		9.28	□□□□□ -0.92
SSBP3-215	ENST00000533946	ZKSCAN5	Q9Y2L8	839 aa		9.28	□□□□□ -0.92
SSBP3-215	ENST00000533946	HEBP2	Q9Y5Z4	205 aa		9.28	□□□□□ -0.92
SSBP3-215	ENST00000533946	USP9X	Q93008	2570 aa	Predicted RBP	9.28	□□□□□ -0.92
SSBP3-215	ENST00000533946	MDC1	Q14676	2089 aa	Known RBP	9.28	□□□□□ -0.92
SSBP3-215	ENST00000533946	IGKV1-8	A0A0C4DH67	115 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	ARGFX	A6NJG6	315 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	ARHGEF33	A8MVX0	844 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	C2orf74	A8MZ97	194 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	PGRMC1	O00264	195 aa	Known RBP	9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	FFAR3	O14843	346 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	GPR42	O15529	346 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	NRDC	O43847	1150 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	PHF2	O75151	1096 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	KLF7	O75840	302 aa	Predicted RBP	9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	ERVK-10	P10266	1014 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	CD9	P21926	228 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	RPS3	P23396	243 aa	Known RBP eCLIP	9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	PTPN4	P29074	926 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	SLC1A2	P43004	574 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	CCR10	P46092	362 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	GCGR	P47871	477 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	CLCN7	P51798	805 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	PRKAA1	Q13131	559 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	DHX34	Q14147	1143 aa	Known RBP	9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	RBM20	Q5T481	1227 aa	Known RBP	9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	ZNF470	Q6ECI4	717 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	NEPRO	Q6NW34	567 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	TRMT10B	Q6PF06	316 aa	Known RBP	9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	SUSD1	Q6UWL2	747 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	CYHR1	Q6ZMK1	362 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	MBOAT1	Q6ZNC8	495 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	SHISA6	Q6ZSJ9	500 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	KMT5C	Q86Y97	462 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	CILP2	Q8IUL8	1156 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	KLHL7	Q8IXQ5	586 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	ACTRT1	Q8TDG2	376 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	KIAA1143	Q96AT1	154 aa	Predicted RBP	9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	CLIP3	Q96DZ5	547 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	PDLIM2	Q96JY6	352 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	PBK	Q96KB5	322 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	NDN	Q99608	321 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	MIPEP	Q99797	713 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	ACAT2	Q9BWD1	397 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	SLC25A18	Q9H1K4	315 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	ACTR5	Q9H9F9	607 aa	Predicted RBP	9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	MRM3	Q9HC36	420 aa	Known RBP	9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	SLC6A20	Q9NP91	592 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	LUZP4	Q9P127	313 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	FARSA	Q9Y285	508 aa	Known RBP	9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	PCDHGA6	Q9Y5G7	932 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	DOCK10	Q96BY6	2186 aa		9.27	□□□□□ -0.93
SSBP3-215	ENST00000533946	NBPF19	A0A087WUL8	3843 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946		A0A0J9YY10	115 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	KLHL33	A6NCF5	533 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946		A6NL46	340 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946		J3QKU1	62 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	RASGRF2	O14827	1237 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	CPNE3	O75131	537 aa	Known RBP	9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	GAS8	O95995	478 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	CCNYL3	P0C7X3	344 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	SHMT2	P34897	504 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	GMPR	P36959	345 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	CD97	P48960	835 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	TTPA	P49638	278 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	RAB28	P51157	221 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	EFNA3	P52797	238 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	MLLT10	P55197	1068 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	TLE1	Q04724	770 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	SRSF1	Q07955	248 aa	Known RBP eCLIP	9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	DHX9	Q08211	1270 aa	Known RBP	9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	FASTKD3	Q14CZ7	662 aa	Known RBP	9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	TRADD	Q15628	312 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	KLHL38	Q2WGJ6	581 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	PRR30	Q53SZ7	412 aa	Predicted RBP	9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	HSP90AA5P	Q58FG0	334 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	LYPLAL1	Q5VWZ2	237 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	KIAA0930	Q6ICG6	404 aa	Predicted RBP	9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	FIGLA	Q6QHK4	219 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	COX15	Q7KZN9	410 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	NLRP9	Q7RTR0	991 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	PIWIL4	Q7Z3Z4	852 aa	Known RBP	9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	PLD3	Q8IV08	490 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	MCAT	Q8IVS2	390 aa	Known RBP	9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	OR2A1	Q8NGT9	310 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	SKA2	Q8WVK7	121 aa	Predicted RBP	9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	ASZ1	Q8WWH4	475 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	9.26	□□□□□ -0.93	1e-7	■■■■■ 35.3
SSBP3-215	ENST00000533946	LRRC45	Q96CN5	670 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	GBP5	Q96PP8	586 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	PKP4	Q99569	1192 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	MACROD1	Q9BQ69	325 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	VPS37B	Q9H9H4	285 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	ZBTB20	Q9HC78	741 aa	Predicted RBP	9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	IARS2	Q9NSE4	1012 aa	Known RBP	9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	ABCF3	Q9NUQ8	709 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	EURL	Q9NYK6	297 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	ADAMTS6	Q9UKP5	1117 aa		9.26	□□□□□ -0.93
SSBP3-215	ENST00000533946	PLAA	Q9Y263	795 aa		9.26	□□□□□ -0.93

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