RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 MED8Q96G25 268 aa16.92■□□□□ 0.3
NXF1-216ENST00000533499 CCDC138Q96M89 665 aa16.92■□□□□ 0.3
NXF1-216ENST00000533499 NUDT22Q9BRQ3 303 aa16.92■□□□□ 0.3
NXF1-216ENST00000533499 IQCGQ9H095 443 aaKnown RBP16.92■□□□□ 0.3
NXF1-216ENST00000533499 ATG10Q9H0Y0 220 aa16.92■□□□□ 0.3
NXF1-216ENST00000533499 EPB41L1Q9H4G0 881 aa16.92■□□□□ 0.3
NXF1-216ENST00000533499 TOR4AQ9NXH8 423 aa16.92■□□□□ 0.3
NXF1-216ENST00000533499 SPATA7Q9P0W8 599 aa16.92■□□□□ 0.3
NXF1-216ENST00000533499 CPSF2Q9P2I0 782 aaKnown RBP16.92■□□□□ 0.3
NXF1-216ENST00000533499 PCDHGA1Q9Y5H4 931 aa16.92■□□□□ 0.3
NXF1-216ENST00000533499 PIPSLA2A3N6 862 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 OR5K3A6NET4 321 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 CAPN5O15484 640 aaPredicted RBP16.91■□□□□ 0.3
NXF1-216ENST00000533499 SPAG7O75391 227 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 RASSF9O75901 435 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 CPNE6O95741 557 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 SLC16A8O95907 504 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 CHRM5P08912 532 aaPredicted RBP16.91■□□□□ 0.3
NXF1-216ENST00000533499 COL6A2P12110 1019 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 CAPZBP47756 277 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 PNLIPRP1P54315 467 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 GFERP55789 205 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 PPP1CAP62136 330 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 FASTKQ14296 549 aaKnown RBP16.91■□□□□ 0.3
NXF1-216ENST00000533499 PUM1Q14671 1186 aaKnown RBP eCLIP16.91■□□□□ 0.3
NXF1-216ENST00000533499 NR1D2Q14995 579 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 ACAP2Q15057 778 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 PHF19Q5T6S3 580 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 ANKS6Q68DC2 871 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 C16orf46Q6P387 395 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 ISCA2Q86U28 154 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 TRABD2AQ86V40 505 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 FBXO15Q8NCQ5 510 aaPredicted RBP16.91■□□□□ 0.3
NXF1-216ENST00000533499 OR2L8Q8NGY9 312 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 ZNF480Q8WV37 535 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 SMC6Q96SB8 1091 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 OGFRQ9NZT2 677 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 TMEM9Q9P0T7 183 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 NOVA2Q9UNW9 492 aaKnown RBP16.91■□□□□ 0.3
NXF1-216ENST00000533499 OARD1Q9Y530 152 aa16.91■□□□□ 0.3
NXF1-216ENST00000533499 ZNF839A8K0R7 811 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 C2orf74A8MZ97 194 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 UBXN8O00124 270 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 ANXA5P08758 320 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 RBP1P09455 135 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 GFAPP14136 432 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 CSF2RBP32927 897 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 RPA3P35244 121 aaPredicted RBP16.9■□□□□ 0.3
NXF1-216ENST00000533499 HSD17B2P37059 387 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 CCT5P48643 541 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 CSRP3P50461 194 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 AP1S2P56377 157 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 NAE1Q13564 534 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 AGTRAPQ6RW13 159 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 SUSD1Q6UWL2 747 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 RBM44Q6ZP01 1051 aaKnown RBP16.9■□□□□ 0.3
NXF1-216ENST00000533499 PLXDC1Q8IUK5 500 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 ADGRF3Q8IZF5 1079 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 GOLGA6L1Q8N7Z2 621 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 CCDC63Q8NA47 563 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 DENND1AQ8TEH3 1009 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 ZDHHC12Q96GR4 267 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 ACAT2Q9BWD1 397 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 SPHK1Q9NYA1 384 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 DLL3Q9NYJ7 618 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 ACTR10Q9NZ32 417 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 WWOXQ9NZC7 414 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 OR6C2Q9NZP2 312 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 STOX2Q9P2F5 926 aaPredicted RBP16.9■□□□□ 0.3
NXF1-216ENST00000533499 XPR1Q9UBH6 696 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 DCDC2Q9UHG0 476 aa16.9■□□□□ 0.3
NXF1-216ENST00000533499 FAM221BA6H8Z2 402 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 SYCE1LA8MT33 242 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 D6RAR5 112 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 KERAO60938 352 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 GLRA3O75311 464 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 HOXB3P14651 431 aaPredicted RBP16.89■□□□□ 0.29
NXF1-216ENST00000533499 CDH3P22223 829 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 IMPA1P29218 277 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 ID4P47928 161 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 KCNC1P48547 511 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 INSM1Q01101 510 aaPredicted RBP16.89■□□□□ 0.29
NXF1-216ENST00000533499 TGFBIQ15582 683 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 SF1Q15637 639 aaKnown RBP16.89■□□□□ 0.29
NXF1-216ENST00000533499 PPP1R3AQ16821 1122 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 C18orf21Q32NC0 220 aaPredicted RBP16.89■□□□□ 0.29
NXF1-216ENST00000533499 FBXO48Q5FWF7 155 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 N4BP2L1Q5TBK1 243 aaPredicted RBP16.89■□□□□ 0.29
NXF1-216ENST00000533499 HES3Q5TGS1 186 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 CLEC14AQ86T13 490 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 TRIM73Q86UV7 250 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 RASGRP3Q8IV61 690 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 LINC01555Q8NAE3 123 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 WDR48Q8TAF3 677 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 ATL1Q8WXF7 558 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 SMPDL3AQ92484 453 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 GPR78Q96P69 363 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 KLHL25Q9H0H3 589 aa16.89■□□□□ 0.29
NXF1-216ENST00000533499 STMN4Q9H169 189 aaPredicted RBP16.89■□□□□ 0.29
NXF1-216ENST00000533499 TMEM216Q9P0N5 145 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms