RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 ANKRD20A4Q4UJ75 823 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 TCTE1Q5JU00 501 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 TTC27Q6P3X3 843 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 CNSTQ6PJW8 725 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 TRIM73Q86UV7 250 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 RAB43Q86YS6 212 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 REXO1L1PQ8IX06 675 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 ZBTB2Q8N680 514 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 COG1Q8WTW3 980 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 LPGAT1Q92604 370 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 SERPINB12Q96P63 405 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 IP6K3Q96PC2 410 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 FAM167BQ9BTA0 163 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 C20orf96Q9NUD7 363 aaPredicted RBP12.13□□□□□ -0.47
C11orf54-210ENST00000531516 SPHK1Q9NYA1 384 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 SPATA7Q9P0W8 599 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 ANAPC2Q9UJX6 822 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 CRYL1Q9Y2S2 319 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 KCNMB2Q9Y691 235 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 FAM169AQ9Y6X4 670 aa12.13□□□□□ -0.47
C11orf54-210ENST00000531516 TCRBV7S3A2A0A539 114 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 PABPN1LA6NDY0 278 aaKnown RBP12.12□□□□□ -0.47
C11orf54-210ENST00000531516 SMAPO00193 183 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 TERTO14746 1132 aaKnown RBP12.12□□□□□ -0.47
C11orf54-210ENST00000531516 KLHL41O60662 606 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 C1orf105O95561 183 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 GNG11P61952 73 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 DCDP81605 110 aaKnown RBP12.12□□□□□ -0.47
C11orf54-210ENST00000531516 KCNC4Q03721 635 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 ATP1A1-AS1Q5TC04 95 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 YOD1Q5VVQ6 348 aaPredicted RBP12.12□□□□□ -0.47
C11orf54-210ENST00000531516 LRRC8EQ6NSJ5 796 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 RHBDD2Q6NTF9 364 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 UGT3A1Q6NUS8 523 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 SYDE1Q6ZW31 735 aaPredicted RBP12.12□□□□□ -0.47
C11orf54-210ENST00000531516 MICALCLQ6ZW33 695 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 TMEM135Q86UB9 458 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 CAND1Q86VP6 1230 aaKnown RBP12.12□□□□□ -0.47
C11orf54-210ENST00000531516 CILP2Q8IUL8 1156 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 VRK3Q8IV63 474 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 PALM2Q8IXS6 379 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 ENDOVQ8N8Q3 282 aaKnown RBP12.12□□□□□ -0.47
C11orf54-210ENST00000531516 TTC29Q8NA56 475 aaPredicted RBP12.12□□□□□ -0.47
C11orf54-210ENST00000531516 TEX19Q8NA77 164 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 LKAAEAR1Q8TD35 194 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 ZUFSPQ96AP4 578 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 ABHD17AQ96GS6 310 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 VPS50Q96JG6 964 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 ZNF71Q9NQZ8 489 aaPredicted RBP12.12□□□□□ -0.47
C11orf54-210ENST00000531516 PCMTD2Q9NV79 361 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 IFT80Q9P2H3 777 aaPredicted RBP12.12□□□□□ -0.47
C11orf54-210ENST00000531516 KLHL42Q9P2K6 505 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 CDYLQ9Y232 598 aa12.12□□□□□ -0.47
C11orf54-210ENST00000531516 TARM1B6A8C7 271 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 PEX12O00623 359 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 SUV39H1O43463 412 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 NIPSNAP2O75323 286 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 TMEM63AO94886 807 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 CCNDBP1O95273 360 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 ERVK-10P10266 1014 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 ENO3P13929 434 aaPredicted RBP12.11□□□□□ -0.47
C11orf54-210ENST00000531516 PGAM1P18669 254 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 MAGP20916 626 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 ALAS2P22557 587 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 CMPK1P30085 196 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 RORAP35398 523 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 KLRB1Q12918 225 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 GRM7Q14831 915 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 NCF4Q15080 339 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 DEFB110Q30KQ9 67 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 FAM214AQ32MH5 1076 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 PTCHD3Q3KNS1 767 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 MLIPQ5VWP3 458 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 ANKRD22Q5VYY1 191 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 TCTN3Q6NUS6 607 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 ZNF517Q6ZMY9 492 aaPredicted RBP12.11□□□□□ -0.47
C11orf54-210ENST00000531516 TAX1BP1Q86VP1 789 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 PTRH1Q86Y79 214 aaKnown RBP12.11□□□□□ -0.47
C11orf54-210ENST00000531516 MCATQ8IVS2 390 aaKnown RBP12.11□□□□□ -0.47
C11orf54-210ENST00000531516 APLFQ8IW19 511 aaPredicted RBP12.11□□□□□ -0.47
C11orf54-210ENST00000531516 C2orf73Q8N5S3 287 aaPredicted RBP12.11□□□□□ -0.47
C11orf54-210ENST00000531516 ZNF655Q8N720 491 aaPredicted RBP12.11□□□□□ -0.47
C11orf54-210ENST00000531516 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
C11orf54-210ENST00000531516 HMGCLL1Q8TB92 370 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 EURLQ9NYK6 297 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 TCFL5Q9UL49 500 aa12.11□□□□□ -0.47
C11orf54-210ENST00000531516 FASNP49327 2511 aaKnown RBP12.1□□□□□ -0.47
C11orf54-210ENST00000531516 ZBTB14O43829 449 aa12.1□□□□□ -0.47
C11orf54-210ENST00000531516 SRPX2O60687 465 aaPredicted RBP12.1□□□□□ -0.47
C11orf54-210ENST00000531516 VPS26AO75436 327 aa12.1□□□□□ -0.47
C11orf54-210ENST00000531516 CBSLP0DN79 551 aa12.1□□□□□ -0.47
C11orf54-210ENST00000531516 ITGAXP20702 1163 aa12.1□□□□□ -0.47
C11orf54-210ENST00000531516 ARNTP27540 789 aa12.1□□□□□ -0.47
C11orf54-210ENST00000531516 RPA3P35244 121 aaPredicted RBP12.1□□□□□ -0.47
C11orf54-210ENST00000531516 CBSP35520 551 aa12.1□□□□□ -0.47
C11orf54-210ENST00000531516 FOLR3P41439 243 aa12.1□□□□□ -0.47
C11orf54-210ENST00000531516 SKIV2L2P42285 1042 aaKnown RBP12.1□□□□□ -0.47
C11orf54-210ENST00000531516 BDKRB1P46663 353 aa12.1□□□□□ -0.47
C11orf54-210ENST00000531516 RGS4P49798 205 aa12.1□□□□□ -0.47
C11orf54-210ENST00000531516 RPS18P62269 152 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms