RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 IFNEQ86WN2 208 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 OR8J3Q8NGG0 315 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 OR8K3Q8NH51 312 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 ATOH1Q92858 354 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 MYDGFQ969H8 173 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 COQ8BQ96D53 544 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 SLC47A1Q96FL8 570 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 Q96MT0 163 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 FOPNLQ96NB1 174 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 PIGUQ9H490 435 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 RANBP3Q9H6Z4 567 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 EXD2Q9NVH0 621 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 EMC3Q9P0I2 261 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 MBD2Q9UBB5 411 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 PSORS1C1Q9UIG5 152 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 PHF11Q9UIL8 331 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 KCNMB2Q9Y691 235 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 GJA3Q9Y6H8 435 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 U3KQV3 271 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 WASHC1A8K0Z3 465 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 DDX39AO00148 427 aaKnown RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 ARNTLO00327 626 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 ACKR2O00590 384 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 ECDO95905 644 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 C1RP00736 705 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 NCF1P14598 390 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 APLP1P51693 650 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 PGGT1BP53609 377 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 BTN1A1Q13410 526 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 ELOAQ14241 798 aaKnown RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 NKG7Q16617 165 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 SAXO2Q658L1 398 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 LRRC66Q68CR7 880 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 TMPRSS11AQ6ZMR5 421 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 CCDC117Q8IWD4 279 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 CDYL2Q8N8U2 506 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 SLAIN1Q8ND83 568 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 UTP15Q8TED0 518 aaKnown RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 UBASH3BQ8TF42 649 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 HEXDCQ8WVB3 486 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 APH1BQ8WW43 257 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 RADILQ96JH8 1075 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 MARVELD1Q9BSK0 173 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 REG4Q9BYZ8 158 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 CYP4F12Q9HCS2 524 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 OLA1Q9NTK5 396 aaKnown RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 AIG1Q9NVV5 245 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 DTX4Q9Y2E6 619 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 KCNK7Q9Y2U2 307 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 CENPFP49454 3210 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 GREB1Q4ZG55 1949 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 NYNRINQ9P2P1 1898 aaKnown RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 PLA2G10O15496 165 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 WISP3O95389 354 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 CDK1P06493 297 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 CSF3P09919 207 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 H2AFB1P0C5Y9 115 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 H2AFB2P0C5Z0 115 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 PDGFRAP16234 1089 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 ITGALP20701 1170 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 PSMB4P28070 264 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 MAGEA2P43356 314 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 PXNP49023 591 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 SSTP61278 116 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 LARS2Q15031 903 aaKnown RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 ZMYND11Q15326 602 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 PAN2Q504Q3 1202 aaKnown RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 ZMAT1Q5H9K5 638 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 FAM102AQ5T9C2 384 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 NT5DC4Q86YG4 428 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 PSTKQ8IV42 348 aaKnown RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 SLC41A1Q8IVJ1 513 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 P3H2Q8IVL5 708 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 CEP97Q8IW35 865 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 HS3ST5Q8IZT8 346 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 CENPIQ92674 756 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 OMDQ99983 421 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 TSEN34Q9BSV6 310 aaKnown RBP7.95□□□□□ -1.14
CSDE1-214ENST00000530886 PRRG3Q9BZD7 231 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 SLC19A3Q9BZV2 496 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 PRDM12Q9H4Q4 367 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 ZIM2Q9NZV7 527 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 UBQLN2Q9UHD9 624 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 STUB1Q9UNE7 303 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 VPS9D1Q9Y2B5 631 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 DNAJC15Q9Y5T4 150 aa7.95□□□□□ -1.14
CSDE1-214ENST00000530886 MFSD2BA6NFX1 497 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 K7ERI5 159 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 IFRD1O00458 451 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-214ENST00000530886 PPP6CO00743 305 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 KIAA0513O60268 411 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 HCN1O60741 890 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 LGI1O95970 557 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 ITGB6P18564 788 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 HK1P19367 917 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 RPS3P23396 243 aaKnown RBP eCLIP7.94□□□□□ -1.142e-6■■□□□ 11.8
CSDE1-214ENST00000530886 BCAT1P54687 386 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 POU4F1Q01851 419 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 EIF4HQ15056 248 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms