RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SEMA3AQ14563 771 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 SSPNQ14714 243 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 TPSAB1Q15661 275 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 ZIC1Q15915 447 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 RNF187Q5TA31 235 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-212ENST00000527887 LCN10Q6JVE6 187 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 NAPRTQ6XQN6 538 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 MICALCLQ6ZW33 695 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 PRUNE1Q86TP1 453 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 ATCAYQ86WG3 371 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 RAB42Q8N4Z0 105 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 CEP112Q8N8E3 955 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 MNS1Q8NEH6 495 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 MAGEC3Q8TD91 643 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 DLG3Q92796 817 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 RAD51AP1Q96B01 352 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 PBKQ96KB5 322 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 NRTNQ99748 197 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 KIFC1Q9BW19 673 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 TRIM55Q9BYV6 548 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 P2RY12Q9H244 342 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 ENAMQ9NRM1 1142 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 TXLNGQ9NUQ3 528 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 GPN3Q9UHW5 284 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-212ENST00000527887 TARM1B6A8C7 271 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 K7EM74 188 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 RASGRF2O14827 1237 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 SLU7O95391 586 aaKnown RBP13.67□□□□□ -0.22
CAPN1-212ENST00000527887 NR1D1P20393 614 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 VARSP26640 1264 aaKnown RBP13.67□□□□□ -0.22
CAPN1-212ENST00000527887 CCNFP41002 786 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 PTGIRP43119 386 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 ARSFP54793 590 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 ADARP55265 1226 aaKnown RBP13.67□□□□□ -0.22
CAPN1-212ENST00000527887 PTCHD3Q3KNS1 767 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 ZC3H12BQ5HYM0 836 aaKnown RBP13.67□□□□□ -0.22
CAPN1-212ENST00000527887 YOD1Q5VVQ6 348 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-212ENST00000527887 OTOAQ7RTW8 1153 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 TRIM73Q86UV7 250 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 ZBTB2Q8N680 514 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 OR2L8Q8NGY9 312 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 ZUFSPQ96AP4 578 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 MIB2Q96AX9 1013 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 FER1L6-AS2Q96M78 137 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 FOPNLQ96NB1 174 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 GBP5Q96PP8 586 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 NDC1Q9BTX1 674 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 MENTQ9BUN1 341 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 NDOR1Q9UHB4 597 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 SLC39A10Q9ULF5 831 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 COL12A1Q99715 3063 aa13.67□□□□□ -0.22
CAPN1-212ENST00000527887 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-212ENST00000527887 MAGEB16A2A368 324 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 IQCF5A8MTL0 148 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 CTIFO43310 598 aaKnown RBP13.66□□□□□ -0.22
CAPN1-212ENST00000527887 CEP104O60308 925 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 DPM1O60762 260 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 KLF7O75840 302 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-212ENST00000527887 DNAJB5O75953 348 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 PIM1P11309 404 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-212ENST00000527887 PAMP19021 973 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 PEBP1P30086 187 aaKnown RBP13.66□□□□□ -0.22
CAPN1-212ENST00000527887 MAGEA6P43360 314 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 CSE1LP55060 971 aaKnown RBP13.66□□□□□ -0.22
CAPN1-212ENST00000527887 CKAP4Q07065 602 aaKnown RBP13.66□□□□□ -0.22
CAPN1-212ENST00000527887 UBAP2LQ14157 1087 aaKnown RBP13.66□□□□□ -0.22
CAPN1-212ENST00000527887 NAA25Q14CX7 972 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 IGFBP7Q16270 282 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 TCTE1Q5JU00 501 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 MLIPQ5VWP3 458 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 CPZQ66K79 652 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 ZNF572Q7Z3I7 529 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-212ENST00000527887 VRK3Q8IV63 474 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 LINC01555Q8NAE3 123 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 CFAP61Q8NHU2 1237 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 HMGCLL1Q8TB92 370 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 SPRTNQ9H040 489 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-212ENST00000527887 IRAK4Q9NWZ3 460 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 EURLQ9NYK6 297 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 IL1RAPL1Q9NZN1 696 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-212ENST00000527887 C5AR2Q9P296 337 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 MARCH4Q9P2E8 410 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-212ENST00000527887 IFT80Q9P2H3 777 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-212ENST00000527887 PLAGL1Q9UM63 463 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 SOX13Q9UN79 622 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 VPS9D1Q9Y2B5 631 aa13.66□□□□□ -0.22
CAPN1-212ENST00000527887 PRRC2CQ9Y520 2896 aaKnown RBP13.65□□□□□ -0.22
CAPN1-212ENST00000527887 LRRK2Q5S007 2527 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 PEX12O00623 359 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 SRPX2O60687 465 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-212ENST00000527887 VAPBO95292 243 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 ONECUT2O95948 504 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 ALBP02768 609 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 ESR1P03372 595 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 PDGFAP04085 211 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 CBSLP0DN79 551 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 MAGP20916 626 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 NMBRP28336 390 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 ATP5DP30049 168 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms