RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 NOS3P29474 1203 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 CSNK1DP48730 415 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 CDKN2DP55273 166 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 TTC29Q8NA56 475 aaPredicted RBP14.72□□□□□ -0.05
USP47-207ENST00000527733 NAT14Q8WUY8 206 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 FAM3CQ92520 227 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 LPGAT1Q92604 370 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 IL26Q9NPH9 171 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 C15orf41Q9Y2V0 281 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 TNS1Q9HBL0 1735 aaKnown RBP14.72□□□□□ -0.05
USP47-207ENST00000527733 KLHL33A6NCF5 533 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 NPIPB15A6NHN6 443 aaPredicted RBP14.71□□□□□ -0.05
USP47-207ENST00000527733 SLC16A5O15375 505 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 CST1P01037 141 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 TBC1D21Q8IYX1 336 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 CAMKK1Q8N5S9 505 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 PHF10Q8WUB8 498 aaKnown RBP14.71□□□□□ -0.05
USP47-207ENST00000527733 TRIB3Q96RU7 358 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 ZNF576Q9H609 170 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 HOXC13P31276 330 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 CAPZA2P47755 286 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 PTDSS1P48651 473 aaKnown RBP14.71□□□□□ -0.05
USP47-207ENST00000527733 SLC9A5Q14940 896 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 TMIGD1Q6UXZ0 262 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 ARMCX6Q7L4S7 300 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 C11orf65Q8NCR3 313 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 MRPL38Q96DV4 380 aaKnown RBP14.71□□□□□ -0.05
USP47-207ENST00000527733 DUSP26Q9BV47 211 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 SCML1Q9UN30 329 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 MANBAO00462 879 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 PTX3P26022 381 aaPredicted RBP14.71□□□□□ -0.05
USP47-207ENST00000527733 RGRP47804 291 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 HERC3Q15034 1050 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 TTC23Q5W5X9 447 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 RPS27LQ71UM5 84 aaKnown RBP14.71□□□□□ -0.05
USP47-207ENST00000527733 AMIGO2Q86SJ2 522 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 DNAJB8Q8NHS0 232 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 CMTM7Q96FZ5 175 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 ALG2Q9H553 416 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 EQTNQ9NQ60 294 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 TMEM30AQ9NV96 361 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 CA14Q9ULX7 337 aa14.71□□□□□ -0.05
USP47-207ENST00000527733 H3BNC9 293 aa14.71□□□□□ -0.06
USP47-207ENST00000527733 M0R3G1 203 aa14.71□□□□□ -0.06
USP47-207ENST00000527733 SMNDC1O75940 238 aaKnown RBP eCLIP14.71□□□□□ -0.06
USP47-207ENST00000527733 NT5EP21589 574 aa14.71□□□□□ -0.06
USP47-207ENST00000527733 ZNF648Q5T619 568 aaPredicted RBP14.71□□□□□ -0.06
USP47-207ENST00000527733 EPGNQ6UW88 154 aa14.71□□□□□ -0.06
USP47-207ENST00000527733 OR4E2Q8NGC2 313 aa14.71□□□□□ -0.06
USP47-207ENST00000527733 SLC5A11Q8WWX8 675 aa14.71□□□□□ -0.06
USP47-207ENST00000527733 RMND5BQ96G75 393 aaPredicted RBP14.71□□□□□ -0.06
USP47-207ENST00000527733 NDUFA13Q9P0J0 144 aa14.71□□□□□ -0.06
USP47-207ENST00000527733 C3orf18Q9UK00 162 aa14.71□□□□□ -0.06
USP47-207ENST00000527733 NME7Q9Y5B8 376 aa14.71□□□□□ -0.06
USP47-207ENST00000527733 MAGEB17A8MXT2 336 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 RFXAPO00287 272 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 AP3D1O14617 1153 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 LDB2O43679 373 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 B3GALT2O43825 422 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 CNOT3O75175 753 aaKnown RBP14.7□□□□□ -0.06
USP47-207ENST00000527733 CLPTM1O96005 669 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 ALDH4A1P30038 563 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 GUCA1AP43080 201 aaPredicted RBP14.7□□□□□ -0.06
USP47-207ENST00000527733 GSSP48637 474 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 MINDY4Q4G0A6 757 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 SPIN4Q56A73 249 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 KIAA1161Q6NSJ0 714 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 VN1R2Q8NFZ6 395 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 BCL7CQ8WUZ0 217 aaPredicted RBP14.7□□□□□ -0.06
USP47-207ENST00000527733 SLC17A9Q9BYT1 436 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 PCDHB11Q9Y5F2 797 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 CPN2P22792 545 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 AQP1P29972 269 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 TRPC1P48995 793 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 AMZ1Q400G9 498 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 GKN2Q86XP6 184 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 OR2T34Q8NGX1 318 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 RGMAQ96B86 450 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 ZBED6CLQ96FA7 236 aaPredicted RBP14.7□□□□□ -0.06
USP47-207ENST00000527733 RBM18Q96H35 190 aaKnown RBP14.7□□□□□ -0.06
USP47-207ENST00000527733 ZNF382Q96SR6 550 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 GPR174Q9BXC1 333 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 SAMHD1Q9Y3Z3 626 aaKnown RBP14.7□□□□□ -0.06
USP47-207ENST00000527733 IGLV3-10A0A075B6K4 115 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 PSMD11O00231 422 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 SAP18O00422 153 aaKnown RBP14.7□□□□□ -0.06
USP47-207ENST00000527733 ITGB7P26010 798 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 AGTR2P50052 363 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 NEK2P51955 445 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 GSTM4Q03013 218 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 GCNT6Q5T4J0 391 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 C1orf52Q8N6N3 182 aaKnown RBP14.7□□□□□ -0.06
USP47-207ENST00000527733 RC3H2Q9HBD1 1191 aaKnown RBP14.7□□□□□ -0.06
USP47-207ENST00000527733 ZIM2Q9NZV7 527 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 GPN3Q9UHW5 284 aaPredicted RBP14.7□□□□□ -0.06
USP47-207ENST00000527733 CCL26Q9Y258 94 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 OARD1Q9Y530 152 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 SCN4AP35499 1836 aa14.7□□□□□ -0.06
USP47-207ENST00000527733 CLK3P49761 638 aaKnown RBP14.69□□□□□ -0.06
USP47-207ENST00000527733 PGGT1BP53609 377 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms