RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 NLNQ9BYT8 704 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 CHRNA10Q9GZZ6 450 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 SPRTNQ9H040 489 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-203ENST00000525013 IL1RAPL1Q9NZN1 696 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 RUVBL2Q9Y230 463 aaKnown RBP17.89■□□□□ 0.45
CAPN1-203ENST00000525013 KLHL20Q9Y2M5 609 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 NFS1Q9Y697 457 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 ANKRD12Q6UB98 2062 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 MAGEB16A2A368 324 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 C9J4A7 227 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 H3BMM5 538 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 ZNF185O15231 689 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 HCRTR1O43613 425 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 ESR1P03372 595 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 RAB40ALP0C0E4 278 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 CHRM3P20309 590 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 OGNP20774 298 aaKnown RBP17.88■□□□□ 0.45
CAPN1-203ENST00000525013 MAGP20916 626 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 BDKRB1P46663 353 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 PMS2P54278 862 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 IL10RAQ13651 578 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 THOC5Q13769 683 aaKnown RBP17.88■□□□□ 0.45
CAPN1-203ENST00000525013 GRB7Q14451 532 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 SF1Q15637 639 aaKnown RBP17.88■□□□□ 0.45
CAPN1-203ENST00000525013 ANKRD20A4Q4UJ75 823 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 LACTB2Q53H82 288 aaPredicted RBP17.88■□□□□ 0.45
CAPN1-203ENST00000525013 FAM69BQ5VUD6 431 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 RAB42Q8N4Z0 105 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 OR2L8Q8NGY9 312 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 THAP4Q8WY91 577 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 RAD51AP1Q96B01 352 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 SERPINB12Q96P63 405 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 MENTQ9BUN1 341 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 KCNF1Q9H3M0 494 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 SNX12Q9UMY4 172 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 PLCL2Q9UPR0 1127 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 VPS9D1Q9Y2B5 631 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 NEU2Q9Y3R4 380 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 MAD1L1Q9Y6D9 718 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 AP1M2Q9Y6Q5 423 aa17.88■□□□□ 0.45
CAPN1-203ENST00000525013 FAM237BA0A1B0GVD1 139 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 CTAGE9A4FU28 777 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 E5RI56 91 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 RASGRF2O14827 1237 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 C1orf105O95561 183 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 FNTAP49354 379 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 PPP1R7Q15435 360 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 C1orf189Q5VU69 101 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 ZNF470Q6ECI4 717 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 FAM198BQ6UWH4 519 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 CENPUQ71F23 418 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 CILP2Q8IUL8 1156 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 DNAJC22Q8N4W6 341 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 ZNF655Q8N720 491 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-203ENST00000525013 DPH2Q9BQC3 489 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-203ENST00000525013 RAB11FIP5Q9BXF6 653 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 INTS7Q9NVH2 962 aaKnown RBP17.87■□□□□ 0.45
CAPN1-203ENST00000525013 TLK1Q9UKI8 766 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 TCFL5Q9UL49 500 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 TP53TG5Q9Y2B4 290 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 MRFAP1Q9Y605 127 aa17.87■□□□□ 0.45
CAPN1-203ENST00000525013 TNRC6AQ8NDV7 1962 aaKnown RBP17.87■□□□□ 0.45
CAPN1-203ENST00000525013 ZSCAN9O15535 394 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-203ENST00000525013 DNAJB5O75953 348 aa17.86■□□□□ 0.45
CAPN1-203ENST00000525013 S1PR4O95977 384 aa17.86■□□□□ 0.45
CAPN1-203ENST00000525013 CAPN1P07384 714 aa17.86■□□□□ 0.45
CAPN1-203ENST00000525013 CTSBP07858 339 aa17.86■□□□□ 0.45
CAPN1-203ENST00000525013 PKMP14618 531 aaKnown RBP17.86■□□□□ 0.45
CAPN1-203ENST00000525013 CCNFP41002 786 aa17.86■□□□□ 0.45
CAPN1-203ENST00000525013 GABRA4P48169 554 aa17.86■□□□□ 0.45
CAPN1-203ENST00000525013 ADARP55265 1226 aaKnown RBP17.86■□□□□ 0.45
CAPN1-203ENST00000525013 KCNC4Q03721 635 aa17.86■□□□□ 0.45
CAPN1-203ENST00000525013 CCSMST1Q4G0I0 132 aa17.86■□□□□ 0.45
CAPN1-203ENST00000525013 TLDC1Q6P9B6 456 aa17.86■□□□□ 0.45
CAPN1-203ENST00000525013 ZBTB2Q8N680 514 aa17.86■□□□□ 0.45
CAPN1-203ENST00000525013 TRIM55Q9BYV6 548 aa17.86■□□□□ 0.45
CAPN1-203ENST00000525013 TXLNGQ9NUQ3 528 aa17.86■□□□□ 0.45
CAPN1-203ENST00000525013 EURLQ9NYK6 297 aa17.86■□□□□ 0.45
CAPN1-203ENST00000525013 BSNQ9UPA5 3926 aa17.86■□□□□ 0.45
CAPN1-203ENST00000525013 RP1L1Q8IWN7 2480 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-203ENST00000525013 KRT87PA6NCN2 255 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 ARGFXA6NJG6 315 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 WISP1O95388 367 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 F7P08709 466 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-203ENST00000525013 CBSLP0DN79 551 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 NR1D1P20393 614 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 CBSP35520 551 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 GRIA3P42263 894 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 CHAF1BQ13112 559 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 CTBP1Q13363 440 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 NCF4Q15080 339 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 MLIPQ5VWP3 458 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 CPZQ66K79 652 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 RHBDD2Q6NTF9 364 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 MCATQ8IVS2 390 aaKnown RBP17.85■□□□□ 0.45
CAPN1-203ENST00000525013 APLFQ8IW19 511 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-203ENST00000525013 PPIL6Q8IXY8 311 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 MAGEC3Q8TD91 643 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 ANP32BQ92688 251 aaKnown RBP17.85■□□□□ 0.45
CAPN1-203ENST00000525013 NDC1Q9BTX1 674 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms