RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PPP6R3Q5H9R7 873 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 KLHDC7AQ5VTJ3 777 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 PDPK2PQ6A1A2 396 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 MON1BQ7L1V2 547 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 TRIM73Q86UV7 250 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 PHF13Q86YI8 300 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 KBTBD2Q8IY47 623 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 ADGRF3Q8IZF5 1079 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 DNAJC22Q8N4W6 341 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 FLVCR1-AS1Q8TAF5 88 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 CCHCR1Q8TD31 782 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 HDAC10Q969S8 669 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 FKBP10Q96AY3 582 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 RMDN2Q96LZ7 410 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 C12orf66Q96MD2 445 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 SELENOOQ9BVL4 669 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 HES7Q9BYE0 225 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 RNF32Q9H0A6 362 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 RASSF1Q9NS23 344 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 ADAM22Q9P0K1 906 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 IL17CQ9P0M4 197 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 PCSK1NQ9UHG2 260 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 NPIPA1Q9UND3 350 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 RPL26L1Q9UNX3 145 aaKnown RBP8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 SHOC2Q9UQ13 582 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 ZDHHC9Q9Y397 364 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 MRPS2Q9Y399 296 aaKnown RBP8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 PKD1L1Q8TDX9 2849 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 BICDL2A1A5D9 508 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 EIF3CLB5ME19 914 aaKnown RBP8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 FAM227AF5H4B4 570 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 F8VZ95 297 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 MSTNO14793 375 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 AURKAO14965 403 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 ASNA1O43681 348 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 SMNDC1O75940 238 aaKnown RBP eCLIP8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 USP1O94782 785 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 ATE1O95260 518 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 SMC2O95347 1197 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 COX6A1P12074 109 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 CES1P23141 567 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 ARSEP51690 589 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 ITKQ08881 620 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 PRKAA1Q13131 559 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 SNTB1Q13884 538 aaKnown RBP8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 RBBP7Q16576 425 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 SLC5A12Q1EHB4 618 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 DEFB113Q30KQ7 82 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 VWA3BQ502W6 1294 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 HIBCHQ6NVY1 386 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 CEP128Q6ZU80 1094 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 CDC20BQ86Y33 519 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 CCDC71Q8IV32 467 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 RPRMLQ8N4K4 120 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 CPLX3Q8WVH0 158 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 ZNF653Q96CK0 615 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 COX4I2Q96KJ9 171 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 VPS35Q96QK1 796 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 TRIB3Q96RU7 358 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 EIF3CQ99613 913 aaKnown RBP8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 POLR1EQ9GZS1 481 aaKnown RBP8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 CLEC4MQ9H2X3 399 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 SRMSQ9H3Y6 488 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 DEF6Q9H4E7 631 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 MRM3Q9HC36 420 aaKnown RBP8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 RNF6Q9Y252 685 aa8.47□□□□□ -1.05
TRAPPC9-212ENST00000521944 ZNF407Q9C0G0 2248 aa8.46□□□□□ -1.05
TRAPPC9-212ENST00000521944 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.46□□□□□ -1.05
TRAPPC9-212ENST00000521944 FAM237BA0A1B0GVD1 139 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 ASPDHA6ND91 283 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 OR5H15A6NDH6 313 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 OR2AG2A6NM03 316 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 RNF212BA8MTL3 300 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 MATN2O00339 956 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 PRPSAP2O60256 369 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 KLK8O60259 260 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 PMPCBO75439 489 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 MED26O95402 600 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 SERPINA7P05543 415 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 ITGAMP11215 1152 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 UCHL3P15374 230 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 ST13P50502 369 aaKnown RBP8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 CDH6P55285 790 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 ATP13A4Q4VNC1 1196 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 ZNF766Q5HY98 468 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 TLDC1Q6P9B6 456 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 TMEM220Q6QAJ8 160 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 PAMR1Q6UXH9 720 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 POLNQ7Z5Q5 900 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 CAMKMTQ7Z624 323 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 TMTC1Q8IUR5 882 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 CREBRFQ8IUR6 639 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 ZZZ3Q8IYH5 903 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 BBS5Q8N3I7 341 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 ATPAF2Q8N5M1 289 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 C19orf47Q8N9M1 422 aaKnown RBP8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 LCN9Q8WX39 176 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 MAML1Q92585 1016 aa8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 RMND5BQ96G75 393 aaPredicted RBP8.46□□□□□ -1.06
TRAPPC9-212ENST00000521944 PWWP2AQ96N64 755 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms