RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 MED7O43513 233 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 CLDN11O75508 207 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 GCATO75600 419 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 CNTN5O94779 1100 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 PAK4O96013 591 aaPredicted RBP5.87□□□□□ -1.47
PABPC1-216ENST00000520868 AFPP02771 609 aaKnown RBP5.87□□□□□ -1.47
PABPC1-216ENST00000520868 RHOCP08134 193 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 TGM2P21980 687 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 HNRNPA2B1P22626 353 aaKnown RBP5.87□□□□□ -1.47
PABPC1-216ENST00000520868 RRM1P23921 792 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 RBMS1P29558 406 aaKnown RBP5.87□□□□□ -1.47
PABPC1-216ENST00000520868 PTGER1P34995 402 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 USP8P40818 1118 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 DNA2P51530 1060 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 UCNP55089 124 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 CDH4P55283 916 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 STX17P56962 302 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 ERVPABLB-1P60509 514 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 HNRNPKP61978 463 aaKnown RBP eCLIP5.87□□□□□ -1.47
PABPC1-216ENST00000520868 RPS16P62249 146 aaKnown RBP5.87□□□□□ -1.47
PABPC1-216ENST00000520868 KRT83P78385 493 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 TIAL1Q01085 375 aaKnown RBP eCLIP5.87□□□□□ -1.472e-22■■■■■ 42.9
PABPC1-216ENST00000520868 CCDC15Q0P6D6 951 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 PDCLQ13371 301 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 STIM1Q13586 685 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 CDKN3Q16667 212 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 ISXQ2M1V0 245 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 DEFB133Q30KQ1 61 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 COBLL1Q53SF7 1204 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 EFHC1Q5JVL4 640 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 NEK5Q6P3R8 708 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 GJB7Q6PEY0 223 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 LINGO4Q6UY18 593 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 ERN2Q76MJ5 926 aaKnown RBP5.87□□□□□ -1.47
PABPC1-216ENST00000520868 EFL1Q7Z2Z2 1120 aaKnown RBP5.87□□□□□ -1.47
PABPC1-216ENST00000520868 PTAR1Q7Z6K3 402 aaPredicted RBP5.87□□□□□ -1.47
PABPC1-216ENST00000520868 SLC22A18ASQ8N1D0 253 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 WDTC1Q8N5D0 677 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 FAM156AQ8NDB6 213 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 OR2A12Q8NGT7 310 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 LMX1AQ8TE12 382 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 DENND1AQ8TEH3 1009 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 WBP1Q96G27 269 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 ATXN7L3BQ96GX2 97 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 PPP1R13BQ96KQ4 1090 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 CCDC114Q96M63 670 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 PSMB7Q99436 277 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 QTRT1Q9BXR0 403 aaKnown RBP5.87□□□□□ -1.47
PABPC1-216ENST00000520868 SLC17A9Q9BYT1 436 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 ASCL3Q9NQ33 180 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 THSD1Q9NS62 852 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 NLGN3Q9NZ94 848 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 IL36AQ9UHA7 158 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 TBC1D30Q9Y2I9 924 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 OR51B4Q9Y5P0 310 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 SNX10Q9Y5X0 201 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 U3KQA8 63 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 DOCK9Q9BZ29 2069 aa5.87□□□□□ -1.47
PABPC1-216ENST00000520868 PIEZO2Q9H5I5 2752 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 MAST4O15021 2626 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 FAM170AA1A519 330 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 GOLGA6L4A6NEF3 574 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 A6NNZ2 444 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 VSTM5A8MXK1 200 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 TPP1O14773 563 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 RAD51BO15315 384 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 AQP9O43315 295 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 SLC28A2O43868 658 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 HSF2BPO75031 334 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 ADCY5O95622 1261 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 CSF2P04141 144 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 GP1BAP07359 652 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 CYP2A6P11509 494 aaPredicted RBP5.86□□□□□ -1.47
PABPC1-216ENST00000520868 ACVR2AP27037 513 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 SGCGQ13326 291 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 C1orf61Q13536 156 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 PDE1CQ14123 709 aaPredicted RBP5.86□□□□□ -1.47
PABPC1-216ENST00000520868 FZD2Q14332 565 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 GBX1Q14549 363 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 DRAP1Q14919 205 aaPredicted RBP5.86□□□□□ -1.47
PABPC1-216ENST00000520868 ZNF750Q32MQ0 723 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 ZSCAN23Q3MJ62 389 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 ALFQ53S48 1182 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 TPRG1LQ5T0D9 272 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 GUSBP11Q6P575 273 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 ZNF813Q6ZN06 617 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 C11orf57Q6ZUT1 292 aaPredicted RBP5.86□□□□□ -1.47
PABPC1-216ENST00000520868 FAM183BPQ6ZVS7 135 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 BCDIN3DQ7Z5W3 292 aaKnown RBP5.86□□□□□ -1.47
PABPC1-216ENST00000520868 TFAP2DQ7Z6R9 452 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 ABI3BPQ7Z7G0 1075 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 CREBRFQ8IUR6 639 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 SPATA20Q8TB22 786 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 NELFBQ8WX92 580 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 DHTKD1Q96HY7 919 aaPredicted RBP5.86□□□□□ -1.47
PABPC1-216ENST00000520868 FEM1CQ96JP0 617 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 CPXM1Q96SM3 734 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 IL12RB2Q99665 862 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 FAM118BQ9BPY3 351 aa5.86□□□□□ -1.47
PABPC1-216ENST00000520868 CRACR2AQ9BSW2 395 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms