RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 CCDC122Q5T0U0 273 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 HECTD3Q5T447 861 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 CCDC181Q5TID7 509 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 VWA5B1Q5TIE3 1220 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 LRRC38Q5VT99 294 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 TAF3Q5VWG9 929 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 NAA35Q5VZE5 725 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 PLPP4Q5VZY2 271 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 OR6B2Q6IFH4 312 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 SPOPLQ6IQ16 392 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 PLEKHA7Q6IQ23 1121 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 ALKBH5Q6P6C2 394 aaKnown RBP1.87□□□□□ -2.11
CCNC-208ENST00000519617 FAM171BQ6P995 826 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 C4orf22Q6V702 233 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 TMEM184AQ6ZMB5 413 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 STRADAQ7RTN6 431 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 CCDC186Q7Z3E2 898 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 TMEM110Q86TL2 294 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 ACOT1Q86TX2 421 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 SLC47A2Q86VL8 602 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 VSIG1Q86XK7 387 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 PALB2Q86YC2 1186 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 KLBQ86Z14 1044 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 LRRC49Q8IUZ0 686 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 SCN4BQ8IWT1 228 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 SUGP1Q8IWZ8 645 aaKnown RBP1.87□□□□□ -2.11
CCNC-208ENST00000519617 NAGSQ8N159 534 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 DPP10Q8N608 796 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 ATP6V0D2Q8N8Y2 350 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 SLC4A11Q8NBS3 891 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 POC1AQ8NBT0 407 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 MNS1Q8NEH6 495 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 CMASQ8NFW8 434 aaPredicted RBP1.87□□□□□ -2.11
CCNC-208ENST00000519617 VN1R2Q8NFZ6 395 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 KIF18AQ8NI77 898 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 LNX1Q8TBB1 728 aaPredicted RBP1.87□□□□□ -2.11
CCNC-208ENST00000519617 TMEM163Q8TC26 289 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 KIAA1524Q8TCG1 905 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 SPPL3Q8TCT6 385 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 SLC2A14Q8TDB8 520 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.87□□□□□ -2.11
CCNC-208ENST00000519617 SLC22A17Q8WUG5 538 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 DEPDC1BQ8WUY9 529 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 RFFLQ8WZ73 363 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 SEMA4DQ92854 862 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 FBXO32Q969P5 355 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 PSMG2Q969U7 264 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 MYLPFQ96A32 169 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 ZNF653Q96CK0 615 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 PCED1BQ96HM7 432 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 PKNOX2Q96KN3 472 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 CCDC114Q96M63 670 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 ZMAT2Q96NC0 199 aaKnown RBP1.87□□□□□ -2.11
CCNC-208ENST00000519617 RUNDC3BQ96NL0 473 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 NAP1L5Q96NT1 182 aaPredicted RBP1.87□□□□□ -2.11
CCNC-208ENST00000519617 KLHL5Q96PQ7 755 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 XPO6Q96QU8 1125 aaKnown RBP1.87□□□□□ -2.11
CCNC-208ENST00000519617 TBCBQ99426 244 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 EPYCQ99645 322 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 SLC25A33Q9BSK2 321 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 PI4K2AQ9BTU6 479 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 FRMD8P1Q9BZ68 369 aaPredicted RBP1.87□□□□□ -2.11
CCNC-208ENST00000519617 ZBP1Q9H171 429 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 GANQ9H2C0 597 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 SMYD3Q9H7B4 428 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 APOBEC3GQ9HC16 384 aaKnown RBP1.87□□□□□ -2.11
CCNC-208ENST00000519617 CSNK1G1Q9HCP0 422 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 WDR6Q9NNW5 1121 aaKnown RBP1.87□□□□□ -2.11
CCNC-208ENST00000519617 FAM49BQ9NUQ9 324 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 MIOSQ9NXC5 875 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 OBP2AQ9NY56 170 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.87□□□□□ -2.11
CCNC-208ENST00000519617 CLIC5Q9NZA1 410 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 GDE1Q9NZC3 331 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 DNAJB4Q9UDY4 337 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 CNOT8Q9UFF9 292 aaKnown RBP1.87□□□□□ -2.11
CCNC-208ENST00000519617 RASAL2Q9UJF2 1139 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 FBXW11Q9UKB1 542 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 GTF3C4Q9UKN8 822 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 TSPAN16Q9UKR8 245 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 FBXO4Q9UKT5 387 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 AGO1Q9UL18 857 aaKnown RBP1.87□□□□□ -2.11
CCNC-208ENST00000519617 SCML2Q9UQR0 700 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 ADAM18Q9Y3Q7 739 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 HBS1LQ9Y450 684 aaKnown RBP1.87□□□□□ -2.11
CCNC-208ENST00000519617 JRKLQ9Y4A0 524 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 PTPRJQ12913 1337 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 CENPFP49454 3210 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 DOCK7Q96N67 2140 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 LTBP2Q14767 1821 aa1.87□□□□□ -2.11
CCNC-208ENST00000519617 HTTP42858 3142 aa1.86□□□□□ -2.11
CCNC-208ENST00000519617 LOC105369274A0A096LPK9 316 aa1.86□□□□□ -2.11
CCNC-208ENST00000519617 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.86□□□□□ -2.11
CCNC-208ENST00000519617 IGHV4-28A0A0C4DH34 117 aa1.86□□□□□ -2.11
CCNC-208ENST00000519617 LOC102723532A0A0G2JNH3 316 aa1.86□□□□□ -2.11
CCNC-208ENST00000519617 CXorf51AA0A1B0GTR3 108 aa1.86□□□□□ -2.11
CCNC-208ENST00000519617 MYBPHLA2RUH7 354 aa1.86□□□□□ -2.11
CCNC-208ENST00000519617 CTAGE9A4FU28 777 aa1.86□□□□□ -2.11
CCNC-208ENST00000519617 MAGEA13PA6NCF6 341 aa1.86□□□□□ -2.11
CCNC-208ENST00000519617 GOLGA6CA6NDK9 693 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms