RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 NUCB1Q02818 461 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 MORC3Q14149 939 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ZBTB6Q15916 424 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 TTC31Q49AM3 519 aaPredicted RBP2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 PLA2G4FQ68DD2 849 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 TBC1D3GQ6DHY5 549 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 TBC1D3CQ6IPX1 549 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 SLC30A9Q6PML9 568 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 CLEC18BQ6UXF7 455 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ANKS1BQ7Z6G8 1248 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 TMEM200AQ86VY9 491 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 TICAM1Q8IUC6 712 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 SMC5Q8IY18 1101 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 TBC1D3Q8IZP1 549 aaPredicted RBP2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 BLIDQ8IZY5 108 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 LRRC57Q8N9N7 239 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 SCFD1Q8WVM8 642 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 SECTM1Q8WVN6 248 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 SGF29Q96ES7 293 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ZNF560Q96MR9 790 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 CATSPER2Q96P56 530 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 LRRC3BQ96PB8 259 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 CCNL2Q96S94 520 aaPredicted RBP2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 SEPT5Q99719 369 aaPredicted RBP2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 POLR3CQ9BUI4 534 aaPredicted RBP2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 SORBS1Q9BX66 1292 aaKnown RBP2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ABCG4Q9H172 646 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 POLR3FQ9H1D9 316 aaPredicted RBP2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 SLC25A18Q9H1K4 315 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ACTR5Q9H9F9 607 aaPredicted RBP2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 SGK2Q9HBY8 427 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 PTPRHQ9HD43 1115 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ZDHHC4Q9NPG8 344 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 GDF3Q9NR23 364 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 GEMIN8Q9NWZ8 242 aaKnown RBP2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ARL15Q9NXU5 204 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 WSB2Q9NYS7 404 aaPredicted RBP2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 SLC39A10Q9ULF5 831 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 CNTN6Q9UQ52 1028 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 TCF19Q9Y242 345 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 NCKAP1Q9Y2A7 1128 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ZNF510Q9Y2H8 683 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 C2CD2Q9Y426 696 aa2.8□□□□□ -1.96
ATP6V1C1-204ENST00000518959 A0A1B0GTQ1 180 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 A0A1W2PQF6 199 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 HEATR9A2RTY3 570 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 FAM90A18PA6NE21 464 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 FAM90A16PA6NEW6 464 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 MBD3L5A6NJ08 208 aaPredicted RBP2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 FAM90A9PA6NNJ1 464 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 FAM90A5PA8MXJ8 464 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 FAM72CH0Y354 149 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 TULP2O00295 520 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 CPLX1O14810 134 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ZW10O43264 779 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 EPB41L2O43491 1005 aaKnown RBP2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 LDB2O43679 373 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 CACNG3O60359 315 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 RNASEH1O60930 286 aaKnown RBP2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 LARGE1O95461 756 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 OLFM2O95897 454 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ADRB2P07550 413 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ITGA2BP08514 1039 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 OR52Z1P0C646 297 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 FAM90A15PP0C7V4 464 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 FAM90A14PP0C7W9 464 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ARSAP15289 507 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 NAGAP17050 411 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 HMGA1P17096 107 aaKnown RBP2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 HOXB9P17482 250 aaPredicted RBP2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ANXA13P27216 316 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 RPA1P27694 616 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 PSMA5P28066 241 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 C21orf33P30042 268 aaPredicted RBP2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 AKT1P31749 480 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 CHKAP35790 457 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 OPRD1P41143 372 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 BRCC3P46736 316 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ACADVLP49748 655 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 PEX5P50542 639 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 TPMTP51580 245 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 EVCP57679 992 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 SF3A3Q12874 501 aaKnown RBP eCLIP2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ENPP2Q13822 863 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 LONRF1Q17RB8 773 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ZNF284Q2VY69 593 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ZNF569Q5MCW4 686 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 HES3Q5TGS1 186 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 FAM72AQ5TYM5 149 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 SNX30Q5VWJ9 437 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 SPATA1Q5VX52 437 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 TXNDC8Q6A555 127 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 FAM72DQ6L9T8 149 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 SUSD1Q6UWL2 747 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 CD300LGQ6UXG3 332 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 MARK2Q7KZI7 788 aaKnown RBP2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 C11orf96Q7Z7L8 435 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 ZSCAN30Q86W11 494 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 FAM72BQ86X60 149 aa2.79□□□□□ -1.96
ATP6V1C1-204ENST00000518959 DPP10Q8N608 796 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms