RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 M0QX08 132 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 KPNA4O00629 521 aaPredicted RBP16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 SCAMP3O14828 347 aaKnown RBP16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 RGS4P49798 205 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 VBP1P61758 197 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 GBX1Q14549 363 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 ZC3H12BQ5HYM0 836 aaKnown RBP16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 LRIF1Q5T3J3 769 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 CERS6Q6ZMG9 384 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 LRRC8DQ7L1W4 858 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 ZDHHC21Q8IVQ6 265 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 PIK3C3Q8NEB9 887 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 OR7A2PQ8NGA2 310 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 OR6K2Q8NGY2 324 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 ERLEC1Q96DZ1 483 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 TTLL2Q9BWV7 592 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 ASB8Q9H765 288 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 DNMT3BQ9UBC3 853 aaKnown RBP16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 TRPS1Q9UHF7 1281 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 GABRQQ9UN88 632 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 WDR47O94967 919 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 EBLN1P0CF75 366 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 CKBP12277 381 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 EPORP19235 508 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 TACR1P25103 407 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 MAGEA2P43356 314 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 MASP1P48740 699 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 CLK3P49761 638 aaKnown RBP16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 DAPP51397 102 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 FAM189BP81408 668 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 IL18R1Q13478 541 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 NPTX1Q15818 432 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 CPSF6Q16630 551 aaKnown RBP eCLIP16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 CCSAPQ6IQ19 270 aaPredicted RBP16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 SHQ1Q6PI26 577 aaKnown RBP16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 TRAF7Q6Q0C0 670 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 RNF165Q6ZSG1 346 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 TAS1R1Q7RTX1 841 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 SLC22A15Q8IZD6 547 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 VMP1Q96GC9 406 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 ARHGAP39Q9C0H5 1083 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 KCNH6Q9H252 994 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 RIBC2Q9H4K1 309 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 RETREG1Q9H6L5 497 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 ATP13A3Q9H7F0 1226 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 PCDH12Q9NPG4 1184 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 PPT2Q9UMR5 302 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 ORC6Q9Y5N6 252 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 MICAL3Q7RTP6 2002 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 A0A096LPI6 279 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 PER2O15055 1255 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 ADAM12O43184 909 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 SEPT4O43236 478 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 ERN1O75460 977 aaKnown RBP16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 PDYNP01213 254 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 RPS3P23396 243 aaKnown RBP eCLIP16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 DGKAP23743 735 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 RPS14P62263 151 aaKnown RBP16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 SLC35A2P78381 396 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 IL1RL1Q01638 556 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 NFATC2Q13469 925 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 SMN1Q16637 294 aaKnown RBP16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 GPRC6AQ5T6X5 926 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 PRSS55Q6UWB4 352 aaPredicted RBP16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 RBFAQ8N0V3 343 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 MFSD4AQ8N468 514 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 RORBQ92753 470 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 ULK4Q96C45 1275 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 YIPF6Q96EC8 236 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 REXO5Q96IC2 774 aaKnown RBP16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 MYOCQ99972 504 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 SYT17Q9BSW7 474 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 GPRC5BQ9NZH0 403 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 MAN2B2Q9Y2E5 1009 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 PCDHGA4Q9Y5G9 962 aa16.16■□□□□ 0.18
PCDHGA11-202ENST00000518882 ZNF840PA6NDX5 716 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 GOLGA8CPA6NN73 597 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 K7ERQ8 282 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 RECQL5O94762 991 aaPredicted RBP16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 DIRAS1O95057 198 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 ZNF682O95780 498 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 ALDH2P05091 517 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 EPB42P16452 691 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 IL1RNP18510 177 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 EPHA2P29317 976 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 HALP42357 657 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 RPS3AP61247 264 aaKnown RBP16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 RHOAP61586 193 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 DGCR6Q14129 220 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 ACOX1Q15067 660 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 RFX4Q33E94 735 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 TMEM236Q5W0B7 351 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 CCDC81Q6ZN84 652 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 NCCRP1Q6ZVX7 275 aaPredicted RBP16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 CHST9Q7L1S5 443 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 GALNT10Q86SR1 603 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 TMEM173Q86WV6 379 aaPredicted RBP16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 ZBTB2Q8N680 514 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 UBTD2Q8WUN7 234 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 PIH1D2Q8WWB5 315 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms