RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 IMPA1P29218 277 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 TYK2P29597 1187 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 SHMT2P34897 504 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 CCNFP41002 786 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 MAGEA12P43365 314 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 SEPHS1P49903 392 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 CSRP3P50461 194 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 RAB28P51157 221 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 KPNA2P52292 529 aaKnown RBP9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 INHBCP55103 352 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 GPLD1P80108 840 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 E2F1Q01094 437 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 IFFO1Q0D2I5 559 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 C16orf72Q14CZ0 275 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 PPP1R3AQ16821 1122 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 ISXQ2M1V0 245 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 C18orf21Q32NC0 220 aaPredicted RBP9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 TAF1BQ53T94 588 aaPredicted RBP9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 FBXO48Q5FWF7 155 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 TTC23LQ6PF05 361 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 FOXR1Q6PIV2 292 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 ADGRD1Q6QNK2 874 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 SUSD1Q6UWL2 747 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 TBC1D1Q86TI0 1168 aaPredicted RBP9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 ADGRF3Q8IZF5 1079 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 MREGQ8N565 214 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 NKAPQ8N5F7 415 aaKnown RBP9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 OR9A1PQ8NGU1 263 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 MZB1Q8WU39 189 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 RAD51AP1Q96B01 352 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 ALKBH8Q96BT7 664 aaKnown RBP9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 NXNL1Q96CM4 212 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 TFB2MQ9H5Q4 396 aaKnown RBP9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 ALG9Q9H6U8 611 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 SYTL2Q9HCH5 934 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 ACTR10Q9NZ32 417 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 POLG2Q9UHN1 485 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 KLHL20Q9Y2M5 609 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 ENTPD2Q9Y5L3 495 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 MN1Q10571 1320 aaPredicted RBP9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 SNRNP200O75643 2136 aaKnown RBP9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 KIF26BQ2KJY2 2108 aa9.49□□□□□ -0.89
TOPBP1-209ENST00000513818 WDFY3Q8IZQ1 3526 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 FRYQ5TBA9 3013 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 A0A1W2PNU3 283 aaPredicted RBP9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 A0A1W2PPM1 405 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 ISM1B1AKI9 464 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 NRP2O60462 931 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 PRAMEF10O60809 474 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 RFPL1O75677 317 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 KRT37O76014 449 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 SLC16A8O95907 504 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 C8GP07360 202 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 JUPP14923 745 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 UGT2B7P16662 529 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 TFEBP19484 476 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 CRABP2P29373 138 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 LSSP48449 732 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 YBX1P67809 324 aaKnown RBP9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 PRKAA1Q13131 559 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 SP140Q13342 867 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 C3orf38Q5JPI3 329 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 LRRC8EQ6NSJ5 796 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 ARMC6Q6NXE6 501 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 TMEM71Q6P5X7 295 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 FRA10AC1Q70Z53 315 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 TMPRSS7Q7RTY8 843 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 SYTL1Q8IYJ3 562 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 DCBLD1Q8N8Z6 715 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 OR2L8Q8NGY9 312 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 FLVCR1-AS1Q8TAF5 88 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 PRR7Q8TB68 274 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 ZNF480Q8WV37 535 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 ISL2Q96A47 359 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 ZIM3Q96PE6 472 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 DEPDC7Q96QD5 511 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 MAP3K3Q99759 626 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 CCDC77Q9BR77 488 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 ACAT2Q9BWD1 397 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 SLC12A9Q9BXP2 914 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 DERL2Q9GZP9 239 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 ATG10Q9H0Y0 220 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 ARL15Q9NXU5 204 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 EURLQ9NYK6 297 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 STOX2Q9P2F5 926 aaPredicted RBP9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 TLK1Q9UKI8 766 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 POMT2Q9UKY4 750 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 ZMIZ1Q9ULJ6 1067 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 ACOT9Q9Y305 439 aa9.48□□□□□ -0.89
TOPBP1-209ENST00000513818 A0A087X1B8 175 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 IGHV5-51A0A0C4DH38 117 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 IQANK1A0A1B0GTG1 560 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 A0A1W2PPV9 198 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 PIPSLA2A3N6 862 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 CCDC151A5D8V7 595 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 FAM221BA6H8Z2 402 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 ANKRD33BA6NCL7 494 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 PABPN1LA6NDY0 278 aaKnown RBP9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 SUPT3HB4E1H0 165 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 UBXN8O00124 270 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms