RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 KIAA1211LQ6NV74 962 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 PDZD3Q86UT5 571 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 AMZ2Q86W34 360 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 THOC6Q86W42 341 aaKnown RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 HEATR4Q86WZ0 1026 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 HORMAD1Q86X24 394 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 TRAPPC5Q8IUR0 188 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 LRRC56Q8IYG6 542 aaPredicted RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 CFAP206Q8IYR0 622 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 SLC44A3Q8N4M1 653 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 DPP10Q8N608 796 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 SNX31Q8N9S9 440 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 PLA2G15Q8NCC3 412 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 GLB1L3Q8NCI6 653 aaPredicted RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 DENND6BQ8NEG7 585 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 OR9A1PQ8NGU1 263 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 PROKR1Q8TCW9 393 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 SETD7Q8WTS6 366 aaKnown RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 SKA2Q8WVK7 121 aaPredicted RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 STMN2Q93045 179 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 CMTM7Q96FZ5 175 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 SCARF2Q96GP6 870 aaPredicted RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 CDRT15Q96T59 188 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 PKP4Q99569 1192 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 NPAS2Q99743 824 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 TIMM29Q9BSF4 260 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 SGPP1Q9BX95 441 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 ZDHHC5Q9C0B5 715 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 MKRN2Q9H000 416 aaKnown RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 OR52A5Q9H2C5 316 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 EHD1Q9H4M9 534 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 KCNK12Q9HB15 430 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 ZDHHC4Q9NPG8 344 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 PHPT1Q9NRX4 125 aaPredicted RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 GID8Q9NWU2 228 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 FBXL12Q9NXK8 326 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 TMEM181Q9P2C4 612 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 MAP10Q9P2G4 905 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 STOML1Q9UBI4 398 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 ABCD2Q9UBJ2 740 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 SUCOQ9UBS9 1254 aaKnown RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 KLQ9UEF7 1012 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 GIMAP2Q9UG22 337 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 SERGEFQ9UGK8 458 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 CD300AQ9UGN4 299 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 CROTQ9UKG9 612 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 ACSL5Q9ULC5 683 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 ZNF490Q9ULM2 529 aaPredicted RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 ZFR2Q9UPR6 939 aaKnown RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 EIF3LQ9Y262 564 aaKnown RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 SLC22A14Q9Y267 594 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 TMED5Q9Y3A6 229 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 TSC22D4Q9Y3Q8 395 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 PIAS3Q9Y6X2 628 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 BRWD1Q9NSI6 2320 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 F5P12259 2224 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 C2CD4DB7Z1M9 353 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 CLGNO14967 610 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 ANGPT2O15123 496 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 PRAMEF4O60810 478 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 RNGTTO60942 597 aaKnown RBP8.13□□□□□ -1.11
RNF4-220ENST00000513578 RNASEH2AO75792 299 aaKnown RBP8.13□□□□□ -1.11
RNF4-220ENST00000513578 BCAS2O75934 225 aaPredicted RBP8.13□□□□□ -1.11
RNF4-220ENST00000513578 KLF8O95600 359 aaPredicted RBP8.13□□□□□ -1.11
RNF4-220ENST00000513578 RPN2P04844 631 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 ERGP11308 486 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 PRPS2P11908 318 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 MYCLP1P12525 358 aaPredicted RBP8.13□□□□□ -1.11
RNF4-220ENST00000513578 CAPN3P20807 821 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 KELP23276 732 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 MAPK1P28482 360 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 DPP6P42658 865 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 POLR2JP52435 117 aaKnown RBP8.13□□□□□ -1.11
RNF4-220ENST00000513578 ADPRHP54922 357 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 SEC13P55735 322 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 KCNK10P57789 538 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 AP2B1P63010 937 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 CTBSQ01459 385 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 SLC34A1Q06495 639 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 CHIT1Q13231 466 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 SGCGQ13326 291 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 CEACAM7Q14002 265 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 CCNIQ14094 377 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 FGL2Q14314 439 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 ARHGAP19Q14CB8 494 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 PON2Q15165 354 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 IRF4Q15306 451 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 TLR1Q15399 786 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 NR6A1Q15406 480 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 RFTN2Q52LD8 501 aaPredicted RBP8.13□□□□□ -1.11
RNF4-220ENST00000513578 CMPK2Q5EBM0 449 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 WLSQ5T9L3 541 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 IRAK1BP1Q5VVH5 260 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 IL23RQ5VWK5 629 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 PRAMEF9Q5VWM5 478 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 CAPN13Q6MZZ7 669 aaPredicted RBP8.13□□□□□ -1.11
RNF4-220ENST00000513578 CYP20A1Q6UW02 462 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 EP400NLQ6ZTU2 488 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 LPCAT2Q7L5N7 544 aa8.13□□□□□ -1.11
RNF4-220ENST00000513578 TRIM74Q86UV6 250 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms