RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 C2CD4BA6NLJ0 364 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 KPNA5O15131 536 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 COCHO43405 550 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 RPLP0P05388 317 aaKnown RBP5.34□□□□□ -1.55
GYPB-212ENST00000511198 IRF1P10914 325 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 FGF3P11487 239 aaPredicted RBP5.34□□□□□ -1.55
GYPB-212ENST00000511198 MST1P26927 711 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 MAT2AP31153 395 aaKnown RBP5.34□□□□□ -1.55
GYPB-212ENST00000511198 IDUAP35475 653 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 ME1P48163 572 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 CASP5P51878 434 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 EVCP57679 992 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 MYL5Q02045 173 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 CTTNQ14247 550 aaKnown RBP5.34□□□□□ -1.55
GYPB-212ENST00000511198 PTK2BQ14289 1009 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 PDIA5Q14554 519 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 IMMTQ16891 758 aaKnown RBP5.34□□□□□ -1.55
GYPB-212ENST00000511198 TTC31Q49AM3 519 aaPredicted RBP5.34□□□□□ -1.55
GYPB-212ENST00000511198 WSCD1Q658N2 575 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 FAM90A2PQ658T7 463 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 MYO7BQ6PIF6 2116 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 TRIM65Q6PJ69 517 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 SAMD14Q8IZD0 417 aaPredicted RBP5.34□□□□□ -1.55
GYPB-212ENST00000511198 DCP1BQ8IZD4 617 aaKnown RBP5.34□□□□□ -1.55
GYPB-212ENST00000511198 SLC22A18ASQ8N1D0 253 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 THEM5Q8N1Q8 247 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 ETNPPLQ8TBG4 499 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 ABHD5Q8WTS1 349 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 UCMAQ8WVF2 138 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 TMEM158Q8WZ71 300 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 TMEM159Q96B96 161 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 PKMYT1Q99640 499 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 CMKLR1Q99788 373 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 TMEM121Q9BTD3 319 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 TTLL2Q9BWV7 592 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 RSPH9Q9H1X1 276 aaPredicted RBP5.34□□□□□ -1.55
GYPB-212ENST00000511198 ARL8BQ9NVJ2 186 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 BARHL2Q9NY43 387 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 IFNKQ9P0W0 207 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 MYO1AQ9UBC5 1043 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 PCDHA12Q9UN75 941 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 TNFSF13BQ9Y275 285 aa5.34□□□□□ -1.55
GYPB-212ENST00000511198 HIVEP2P31629 2446 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 FAM237AA0A1B0GTK4 181 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 ERICH2A1L162 156 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 CYB561D2O14569 222 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 MID1O15344 667 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 MSI1O43347 362 aaKnown RBP5.33□□□□□ -1.56
GYPB-212ENST00000511198 DKC1O60832 514 aaKnown RBP eCLIP5.33□□□□□ -1.56
GYPB-212ENST00000511198 ERLIN1O75477 346 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 RNASEH2AO75792 299 aaKnown RBP5.33□□□□□ -1.56
GYPB-212ENST00000511198 SLITRK3O94933 977 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 DUSP1P28562 367 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 CASQ1P31415 396 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 ADPRHP54922 357 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 MC1RQ01726 317 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 FOXM1Q08050 763 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 GPS1Q13098 491 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 GAB1Q13480 694 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 ERV3-1Q14264 604 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 STK38Q15208 465 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 CEBPEQ15744 281 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 ZSCAN26Q16670 478 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 DPCR1Q3MIW9 517 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 FAXCQ5TGI0 409 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 ZNF776Q68DI1 518 aaPredicted RBP5.33□□□□□ -1.56
GYPB-212ENST00000511198 DUS1LQ6P1R4 473 aaKnown RBP5.33□□□□□ -1.56
GYPB-212ENST00000511198 LEKR1Q6ZMV7 388 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 KRBA2Q6ZNG9 492 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 TMTC3Q6ZXV5 915 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 SRLQ86TD4 932 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 PRPF39Q86UA1 669 aaKnown RBP5.33□□□□□ -1.56
GYPB-212ENST00000511198 VSTM4Q8IW00 320 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 APLFQ8IW19 511 aaPredicted RBP5.33□□□□□ -1.56
GYPB-212ENST00000511198 AADATQ8N5Z0 425 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 ARFGAP1Q8N6T3 406 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 CEP112Q8N8E3 955 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 LINC00301Q8NCQ3 95 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 ST6GALNAC3Q8NDV1 305 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 WFDC11Q8NEX6 87 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 NAT6Q93015 286 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 PNPLA2Q96AD5 504 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 TRMT61AQ96FX7 289 aaKnown RBP5.33□□□□□ -1.56
GYPB-212ENST00000511198 SLC25A23Q9BV35 468 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 KIFC3Q9BVG8 833 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 CARD6Q9BX69 1037 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 FAM107BQ9H098 131 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 LRRN3Q9H3W5 708 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 MRPL40Q9NQ50 206 aaKnown RBP5.33□□□□□ -1.56
GYPB-212ENST00000511198 RCOR3Q9P2K3 495 aaPredicted RBP5.33□□□□□ -1.56
GYPB-212ENST00000511198 CYTH4Q9UIA0 394 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 GTF3C4Q9UKN8 822 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 PCDHA7Q9UN72 937 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 HS3ST3B1Q9Y662 390 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 CSNK1G3Q9Y6M4 447 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 UNC13CQ8NB66 2214 aa5.33□□□□□ -1.56
GYPB-212ENST00000511198 TBC1D3DA0A087WVF3 549 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 TBC1D3IA0A087WXS9 549 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 TBC1D3EA0A087X179 549 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 TBC1D3KA0A087X1G2 549 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms