RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 VWA5B1Q5TIE3 1220 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 MLIPQ5VWP3 458 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 LCN10Q6JVE6 187 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 ZNF534Q76KX8 674 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 OTOAQ7RTW8 1153 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 TRIM58Q8NG06 486 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 OR2Y1Q8NGV0 311 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 OR2L8Q8NGY9 312 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 PNPLA2Q96AD5 504 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 FKBP10Q96AY3 582 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 GBP5Q96PP8 586 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 TCF12Q99081 682 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 SMAD5Q99717 465 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 KLHL25Q9H0H3 589 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 FAM60AQ9NP50 221 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 SLAMF7Q9NQ25 335 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 ENAMQ9NRM1 1142 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 SPHK1Q9NYA1 384 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 EURLQ9NYK6 297 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 SLC2A6Q9UGQ3 507 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 TNRC6AQ8NDV7 1962 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 K7EM74 188 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 RASGRF2O14827 1237 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 MAST4O15021 2626 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 ZNF185O15231 689 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 SRPX2O60687 465 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 KLF7O75840 302 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 CCDC175P0C221 793 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 PAMP19021 973 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 OTX2P32243 289 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 RPL22P35268 128 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 GABRA4P48169 554 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 MLLT10P55197 1068 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 SNX1Q13596 522 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 GRM7Q14831 915 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 FAM214AQ32MH5 1076 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 NKAIN1Q4KMZ8 207 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 ZNF655Q8N720 491 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 TTC29Q8NA56 475 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 FDCSPQ8NFU4 85 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 FLVCR1-AS1Q8TAF5 88 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 COG1Q8WTW3 980 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 WDR54Q9H977 334 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 CHRAC1Q9NRG0 131 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 NXT1Q9UKK6 140 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 CDYLQ9Y232 598 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 PTRH2Q9Y3E5 179 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 ANKRD12Q6UB98 2062 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 DOPEY2Q9Y3R5 2298 aa13.09□□□□□ -0.31
CCHCR1-227ENST00000508852 A0A1B0GX78 115 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 PHF2O75151 1096 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 SORBS2O94875 1100 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 ONECUT2O95948 504 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 PDGFAP04085 211 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 CBSLP0DN79 551 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 GP1BBP13224 206 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 TPSB2P20231 275 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 ATP5DP30049 168 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 CBSP35520 551 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 GRIA1P42261 906 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 CSE1LP55060 971 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 ADARP55265 1226 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 SOX8P57073 446 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 SESN2P58004 480 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 BASP1P80723 227 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 CHAF1BQ13112 559 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 ATP1A4Q13733 1029 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 SF1Q15637 639 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 TPSAB1Q15661 275 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 ZIC1Q15915 447 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 CYP2A13Q16696 494 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 FHL5Q5TD97 284 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 JMJD6Q6NYC1 403 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 MRPL14Q6P1L8 145 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 LRRC8BQ6P9F7 803 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 MRGPREQ86SM8 312 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 TRIM73Q86UV7 250 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 MCATQ8IVS2 390 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 CFAP61Q8NHU2 1237 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 HMGCLL1Q8TB92 370 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 SPRTNQ9H040 489 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 ATP13A2Q9NQ11 1180 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 TREX1Q9NSU2 369 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 UTP6Q9NYH9 597 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 MAP4K5Q9Y4K4 846 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 KLK4Q9Y5K2 254 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 FAM169AQ9Y6X4 670 aa13.08□□□□□ -0.32
CCHCR1-227ENST00000508852 SNRNP200O75643 2136 aaKnown RBP13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 MAGEB16A2A368 324 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 ZNF839A8K0R7 811 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 ESR1P03372 595 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 TPBGLP0DKB5 382 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 MAGP20916 626 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 ALAS2P22557 587 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 HSD17B2P37059 387 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 SRSF1Q07955 248 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 AIMP2Q13155 320 aaKnown RBP13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 MYBPC3Q14896 1274 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 DCAF10Q5QP82 559 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 C1orf189Q5VU69 101 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms