RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 DHCR7Q9UBM7 475 aaKnown RBP12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 CIDEBQ9UHD4 219 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 SRPK3Q9UPE1 567 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 PLCL2Q9UPR0 1127 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 KLHL20Q9Y2M5 609 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 ZNF451Q9Y4E5 1061 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 PCDHGB7Q9Y5F8 929 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 ICE1Q9Y2F5 2266 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 TTLL8A6PVC2 850 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 GOLGA6L6A8MZA4 724 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 ZNF185O15231 689 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 CD3EAPO15446 510 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 RPN2P04844 631 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 APOA4P06727 396 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 ITGAXP20702 1163 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 NMBRP28336 390 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 OTX2P32243 289 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 TTPAP49638 278 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 FOXL2P58012 376 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 BASP1P80723 227 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 DCDP81605 110 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 ESPL1Q14674 2120 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 SLC9A5Q14940 896 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 TMED2Q15363 201 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 KCTD19Q17RG1 926 aaPredicted RBP12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 MLIPQ5VWP3 458 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 MRPL14Q6P1L8 145 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 TAX1BP1Q86VP1 789 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 TMEM151BQ8IW70 566 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 Q8NA96 180 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 OR2Y1Q8NGV0 311 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 CFAP61Q8NHU2 1237 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 SMAD5Q99717 465 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 C17orf62Q9BQA9 187 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 IL22Q9GZX6 179 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 TXLNGQ9NUQ3 528 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 EURLQ9NYK6 297 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 GPR83Q9NYM4 423 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 IFT80Q9P2H3 777 aaPredicted RBP12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 ANAPC5Q9UJX4 755 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 ZKSCAN5Q9Y2L8 839 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 PTRH2Q9Y3E5 179 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 UNC79Q9P2D8 2635 aa12.51□□□□□ -0.41
HMGCS1-205ENST00000508319 KRT87PA6NCN2 255 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 A6NL46 340 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 DPM1O60762 260 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 S1PR4O95977 384 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 FGGP02679 453 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 RPS3P23396 243 aaKnown RBP eCLIP12.5□□□□□ -0.414e-17■■□□□ 11.9
HMGCS1-205ENST00000508319 FOLR3P41439 243 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 RAPSNQ13702 412 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 NKAIN1Q4KMZ8 207 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 PRR30Q53SZ7 412 aaPredicted RBP12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 SLC6A19Q695T7 634 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 FCRL6Q6DN72 434 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 JMJD6Q6NYC1 403 aaPredicted RBP12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 MPP5Q8N3R9 675 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 C2orf73Q8N5S3 287 aaPredicted RBP12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 RBMXL3Q8N7X1 1067 aaKnown RBP12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 OR2L8Q8NGY9 312 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 LZTFL1Q9NQ48 299 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 SLC22A11Q9NSA0 550 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 IRAK4Q9NWZ3 460 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 SYBUQ9NX95 663 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 NDOR1Q9UHB4 597 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 GNPTGQ9UJJ9 305 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 G3BP2Q9UN86 482 aaKnown RBP12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 RUVBL2Q9Y230 463 aaKnown RBP12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 DRG1Q9Y295 367 aaKnown RBP12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 MAP4K5Q9Y4K4 846 aa12.5□□□□□ -0.41
HMGCS1-205ENST00000508319 DOCK10Q96BY6 2186 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 RASGRF2O14827 1237 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 PRICKLE3O43900 615 aaPredicted RBP12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 UMODP07911 640 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 TPSB2P20231 275 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 MGAT1P26572 445 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 BDKRB1P46663 353 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 KCNJ1P48048 391 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 SSPNQ14714 243 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 TPSAB1Q15661 275 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 CTSL3PQ5NE16 218 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 DCAF10Q5QP82 559 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 VWA5B1Q5TIE3 1220 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 PTRHD1Q6GMV3 140 aaKnown RBP12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 C4orf22Q6V702 233 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 ZNF662Q6ZS27 426 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 PPP1R32Q7Z5V6 425 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 LRRC6Q86X45 466 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 HPS6Q86YV9 775 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 GALNT11Q8NCW6 608 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 SLC22A18Q96BI1 424 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 MFSD3Q96ES6 412 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 IP6K3Q96PC2 410 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 PANX3Q96QZ0 392 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 NDC1Q9BTX1 674 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 KIFC1Q9BW19 673 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 RAB11FIP5Q9BXF6 653 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 MRM3Q9HC36 420 aaKnown RBP12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 ENAMQ9NRM1 1142 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms