RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 AP3B1O00203 1094 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 KDM1AO60341 852 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 NIPSNAP2O75323 286 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 CD9P21926 228 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 RPS3P23396 243 aaKnown RBP eCLIP13.75□□□□□ -0.21
RAB28-205ENST00000508274 MAGEA6P43360 314 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 FOXL2P58012 376 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 NCF4Q15080 339 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 TYSND1Q2T9J0 566 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 UNC5DQ6UXZ4 953 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 CAND1Q86VP6 1230 aaKnown RBP13.75□□□□□ -0.21
RAB28-205ENST00000508274 SPNS2Q8IVW8 549 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 DNAJC22Q8N4W6 341 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 LPGAT1Q92604 370 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 MAGOHBQ96A72 148 aaKnown RBP13.75□□□□□ -0.21
RAB28-205ENST00000508274 PANX3Q96QZ0 392 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 RASGRF2O14827 1237 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 NRDCO43847 1150 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 RPN2P04844 631 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 FMO4P31512 558 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 IGFBP7Q16270 282 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 MRNIPQ6NTE8 343 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 CASC4Q6P4E1 433 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 CNSTQ6PJW8 725 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 ASB18Q6ZVZ8 466 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 OTOAQ7RTW8 1153 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 LRRC6Q86X45 466 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 TMEM151BQ8IW70 566 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 ZNF655Q8N720 491 aaPredicted RBP13.75□□□□□ -0.21
RAB28-205ENST00000508274 OR2L8Q8NGY9 312 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 SKA2Q8WVK7 121 aaPredicted RBP13.75□□□□□ -0.21
RAB28-205ENST00000508274 CHRNA10Q9GZZ6 450 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 ING2Q9H160 280 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 ACSS2Q9NR19 701 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 GALPQ9UBC7 116 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 CRYL1Q9Y2S2 319 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 JRKLQ9Y4A0 524 aa13.75□□□□□ -0.21
RAB28-205ENST00000508274 ANKRD12Q6UB98 2062 aa13.74□□□□□ -0.21
RAB28-205ENST00000508274 FLNCQ14315 2725 aa13.74□□□□□ -0.21
RAB28-205ENST00000508274 GOLGA8MH3BSY2 632 aa13.74□□□□□ -0.21
RAB28-205ENST00000508274 ZSCAN9O15535 394 aaPredicted RBP13.74□□□□□ -0.21
RAB28-205ENST00000508274 HBQ1P09105 142 aa13.74□□□□□ -0.21
RAB28-205ENST00000508274 PSMB5P28074 263 aa13.74□□□□□ -0.21
RAB28-205ENST00000508274 COILP38432 576 aaPredicted RBP13.74□□□□□ -0.21
RAB28-205ENST00000508274 CCL11P51671 97 aa13.74□□□□□ -0.21
RAB28-205ENST00000508274 KLRB1Q12918 225 aa13.74□□□□□ -0.21
RAB28-205ENST00000508274 SLC9A5Q14940 896 aa13.74□□□□□ -0.21
RAB28-205ENST00000508274 KIAA0930Q6ICG6 404 aaPredicted RBP13.74□□□□□ -0.21
RAB28-205ENST00000508274 RHBDD2Q6NTF9 364 aa13.74□□□□□ -0.21
RAB28-205ENST00000508274 AGGF1Q8N302 714 aaeCLIP13.74□□□□□ -0.214e-13■■■□□ 17.8
RAB28-205ENST00000508274 ZBTB2Q8N680 514 aa13.74□□□□□ -0.21
RAB28-205ENST00000508274 GSDMBQ8TAX9 411 aa13.74□□□□□ -0.21
RAB28-205ENST00000508274 COG1Q8WTW3 980 aa13.74□□□□□ -0.21
RAB28-205ENST00000508274 GBP5Q96PP8 586 aa13.74□□□□□ -0.21
RAB28-205ENST00000508274 IRAK4Q9NWZ3 460 aa13.74□□□□□ -0.21
RAB28-205ENST00000508274 C9J4A7 227 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 C1orf105O95561 183 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 S1PR4O95977 384 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 AGXTP21549 392 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 GRIA3P42263 894 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 GBX1Q14549 363 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 CYP1B1Q16678 543 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 MLIPQ5VWP3 458 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 FCRL6Q6DN72 434 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 CCDC137Q6PK04 289 aaKnown RBP13.73□□□□□ -0.21
RAB28-205ENST00000508274 CENPUQ71F23 418 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 REXO1L1PQ8IX06 675 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 SLC35F6Q8N357 371 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 DENND1AQ8TEH3 1009 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 ZNF669Q96BR6 464 aaPredicted RBP13.73□□□□□ -0.21
RAB28-205ENST00000508274 PBKQ96KB5 322 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 SERPINB12Q96P63 405 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 DPH2Q9BQC3 489 aaPredicted RBP13.73□□□□□ -0.21
RAB28-205ENST00000508274 EURLQ9NYK6 297 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.73□□□□□ -0.21
RAB28-205ENST00000508274 SLC39A10Q9ULF5 831 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 PLCL2Q9UPR0 1127 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 NEU2Q9Y3R4 380 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 AP1M2Q9Y6Q5 423 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 PCM1Q15154 2024 aa13.73□□□□□ -0.21
RAB28-205ENST00000508274 PGRMC1O00264 195 aaKnown RBP13.72□□□□□ -0.21
RAB28-205ENST00000508274 PRICKLE3O43900 615 aaPredicted RBP13.72□□□□□ -0.21
RAB28-205ENST00000508274 NRP2O60462 931 aa13.72□□□□□ -0.21
RAB28-205ENST00000508274 CNOT3O75175 753 aaKnown RBP13.72□□□□□ -0.21
RAB28-205ENST00000508274 KLF7O75840 302 aaPredicted RBP13.72□□□□□ -0.21
RAB28-205ENST00000508274 OGNP20774 298 aaKnown RBP13.72□□□□□ -0.21
RAB28-205ENST00000508274 MCM3P25205 808 aa13.72□□□□□ -0.21
RAB28-205ENST00000508274 SARNPP82979 210 aaKnown RBP13.72□□□□□ -0.21
RAB28-205ENST00000508274 ATP1A4Q13733 1029 aa13.72□□□□□ -0.21
RAB28-205ENST00000508274 DHX34Q14147 1143 aaKnown RBP13.72□□□□□ -0.21
RAB28-205ENST00000508274 SF1Q15637 639 aaKnown RBP13.72□□□□□ -0.21
RAB28-205ENST00000508274 RNF187Q5TA31 235 aaPredicted RBP13.72□□□□□ -0.21
RAB28-205ENST00000508274 FIGLAQ6QHK4 219 aa13.72□□□□□ -0.21
RAB28-205ENST00000508274 SDCCAG8Q86SQ7 713 aaPredicted RBP13.72□□□□□ -0.21
RAB28-205ENST00000508274 CILP2Q8IUL8 1156 aa13.72□□□□□ -0.21
RAB28-205ENST00000508274 TEX19Q8NA77 164 aa13.72□□□□□ -0.21
RAB28-205ENST00000508274 RAD51AP1Q96B01 352 aa13.72□□□□□ -0.21
RAB28-205ENST00000508274 SLC25A23Q9BV35 468 aa13.72□□□□□ -0.21
RAB28-205ENST00000508274 SAMD15Q9P1V8 674 aa13.72□□□□□ -0.21
RAB28-205ENST00000508274 HECTD1Q9ULT8 2610 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms