RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CLVS1Q8IUQ0 354 aaPredicted RBP14.13□□□□□ -0.15
DDX41-208ENST00000507955 DPP10Q8N608 796 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 MRPL43Q8N983 215 aaKnown RBP14.13□□□□□ -0.15
DDX41-208ENST00000507955 FBXO30Q8TB52 745 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 ISOC1Q96CN7 298 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 CENPNQ96H22 339 aaPredicted RBP14.13□□□□□ -0.15
DDX41-208ENST00000507955 CPEB1Q9BZB8 566 aaKnown RBP14.13□□□□□ -0.15
DDX41-208ENST00000507955 SLC32A1Q9H598 525 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 LTB4R2Q9NPC1 389 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 EIF3LQ9Y262 564 aaKnown RBP14.13□□□□□ -0.15
DDX41-208ENST00000507955 PPIL1Q9Y3C6 166 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 FOXD2O60548 495 aaPredicted RBP14.13□□□□□ -0.15
DDX41-208ENST00000507955 EFNA1P20827 205 aaPredicted RBP14.13□□□□□ -0.15
DDX41-208ENST00000507955 CTNNB1P35222 781 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 CTSCP53634 463 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 PWP1Q13610 501 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 NKG7Q16617 165 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 ZIK1Q3SY52 487 aaPredicted RBP14.13□□□□□ -0.15
DDX41-208ENST00000507955 ANKRD34AQ69YU3 496 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 ASB11Q8WXH4 323 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 APIPQ96GX9 242 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 ZFYVE19Q96K21 471 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 OR52E6Q96RD3 313 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 INPP5KQ9BT40 448 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 EBPLQ9BY08 206 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 PARVBQ9HBI1 364 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 ERVW-1Q9UQF0 538 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 COQ6Q9Y2Z9 468 aa14.13□□□□□ -0.15
DDX41-208ENST00000507955 TRIM64A6NGJ6 449 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 ARHGEF15O94989 841 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 KCNH1O95259 989 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 SNAP29O95721 258 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 MYOGP15173 224 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 PBLDP30039 288 aaPredicted RBP14.12□□□□□ -0.15
DDX41-208ENST00000507955 RECQLP46063 649 aaPredicted RBP14.12□□□□□ -0.15
DDX41-208ENST00000507955 USP39Q53GS9 565 aaKnown RBP14.12□□□□□ -0.15
DDX41-208ENST00000507955 GCNT7Q6ZNI0 430 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 TRIM46Q7Z4K8 759 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 SPRED1Q7Z699 444 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 TRIM74Q86UV6 250 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 C12orf40Q86WS4 652 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 SFTPA1Q8IWL2 248 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 PACRGLQ8N7B6 248 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 HSPBAP1Q96EW2 488 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 NSMCE2Q96MF7 247 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 WRAP53Q9BUR4 548 aaKnown RBP14.12□□□□□ -0.15
DDX41-208ENST00000507955 FAM83DQ9H4H8 585 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 RDH14Q9HBH5 336 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 IRAK4Q9NWZ3 460 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 RHBDL2Q9NX52 303 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 LMCD1Q9NZU5 365 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 IGLV3-16A0A075B6K0 115 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 RASAL1O95294 804 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 TCF3P15923 654 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 TIMP2P16035 220 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 HTR1EP28566 365 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 DDX39BQ13838 428 aaKnown RBP14.12□□□□□ -0.15
DDX41-208ENST00000507955 PLCL1Q15111 1095 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 KLHL35Q6PF15 583 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 HS3ST5Q8IZT8 346 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 FRS2Q8WU20 508 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 USP7Q93009 1102 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 C12orf43Q96C57 262 aaKnown RBP14.12□□□□□ -0.15
DDX41-208ENST00000507955 MRGPRX3Q96LB0 322 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 DCUN1D5Q9BTE7 237 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 SLC12A9Q9BXP2 914 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 C1orf109Q9NX04 203 aa14.12□□□□□ -0.15
DDX41-208ENST00000507955 ARNTLO00327 626 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 GPIP06744 558 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 HIST1H2AGP0C0S8 130 aaPredicted RBP14.11□□□□□ -0.15
DDX41-208ENST00000507955 PTPN2P17706 415 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 POLR2EP19388 210 aaKnown RBP14.11□□□□□ -0.15
DDX41-208ENST00000507955 HIST1H2ADP20671 130 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 HALP42357 657 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 CDKN2CP42773 168 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 PGS1Q32NB8 556 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 CHST15Q7LFX5 561 aaPredicted RBP14.11□□□□□ -0.15
DDX41-208ENST00000507955 GPR141Q7Z602 305 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 METTL3Q86U44 580 aaKnown RBP14.11□□□□□ -0.15
DDX41-208ENST00000507955 GPR180Q86V85 440 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 ZNF784Q8NCA9 323 aaPredicted RBP14.11□□□□□ -0.15
DDX41-208ENST00000507955 HIST1H2AHQ96KK5 128 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 APOLD1Q96LR9 279 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 ZNF641Q96N77 438 aaPredicted RBP14.11□□□□□ -0.15
DDX41-208ENST00000507955 MTERF1Q99551 399 aaKnown RBP14.11□□□□□ -0.15
DDX41-208ENST00000507955 HIST1H2AJQ99878 128 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 H2AFJQ9BTM1 129 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 NPLQ9BXD5 320 aaPredicted RBP14.11□□□□□ -0.15
DDX41-208ENST00000507955 EMILIN2Q9BXX0 1053 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 ELOVL6Q9H5J4 265 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 NTN4Q9HB63 628 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 TRPS1Q9UHF7 1281 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 PCDHB14Q9Y5E9 798 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 A0A087WXM4 84 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 SLC28A1O00337 649 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 IFRD1O00458 451 aaPredicted RBP14.11□□□□□ -0.15
DDX41-208ENST00000507955 TSPAN6O43657 245 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 ATE1O95260 518 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 HLA-EP13747 358 aa14.11□□□□□ -0.15
DDX41-208ENST00000507955 SYN1P17600 705 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms