RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 HNRNPRO43390 633 aaKnown RBP17.18■□□□□ 0.34
SFXN1-208ENST00000507823 SEC22BO75396 215 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 UMPSP11172 480 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 OPRD1P41143 372 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 CCR3P51677 355 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 CLDN8P56748 225 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 XKR5Q6UX68 686 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 DNAJB8Q8NHS0 232 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 SELENOMQ8WWX9 145 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 PPP1R16AQ96I34 528 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 WRAP53Q9BUR4 548 aaKnown RBP17.18■□□□□ 0.34
SFXN1-208ENST00000507823 DPY30Q9C005 99 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 RECQL5O94762 991 aaPredicted RBP17.18■□□□□ 0.34
SFXN1-208ENST00000507823 CATP04040 527 aaKnown RBP17.18■□□□□ 0.34
SFXN1-208ENST00000507823 DGKQP52824 942 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 AAK1Q2M2I8 961 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 AASDHQ4L235 1098 aaPredicted RBP17.18■□□□□ 0.34
SFXN1-208ENST00000507823 SYTL3Q4VX76 610 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 TMEM220Q6QAJ8 160 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 UGT2A3Q6UWM9 527 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 PROSER1Q86XN7 944 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 SPPL2CQ8IUH8 684 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 OR56A3Q8NH54 315 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 NUS1Q96E22 293 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 ZNF597Q96LX8 424 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 TMEM74Q96NL1 305 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 HDAC8Q9BY41 377 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 ZCCHC2Q9C0B9 1178 aaKnown RBP17.18■□□□□ 0.34
SFXN1-208ENST00000507823 Q9H521 79 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 ELOVL6Q9H5J4 265 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 DLGAP2Q9P1A6 1054 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 PDP2Q9P2J9 529 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 EGFL7Q9UHF1 273 aa17.18■□□□□ 0.34
SFXN1-208ENST00000507823 KANSL1LA0AUZ9 987 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 SGO1Q5FBB7 561 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 FRG2Q64ET8 278 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 VITQ6UXI7 678 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 TMEM184AQ6ZMB5 413 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 PYCR2Q96C36 320 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 FRG2BQ96QU4 278 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 MCOLN1Q9GZU1 580 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 STOX2Q9P2F5 926 aaPredicted RBP17.17■□□□□ 0.34
SFXN1-208ENST00000507823 THAP10Q9P2Z0 257 aaPredicted RBP17.17■□□□□ 0.34
SFXN1-208ENST00000507823 TRBV5-3A0A0A0MS03 114 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 C6P13671 934 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 MAP4P27816 1152 aaKnown RBP17.17■□□□□ 0.34
SFXN1-208ENST00000507823 EIF2DP41214 584 aaKnown RBP17.17■□□□□ 0.34
SFXN1-208ENST00000507823 CSTF3Q12996 717 aaKnown RBP17.17■□□□□ 0.34
SFXN1-208ENST00000507823 MIEF2Q96C03 454 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 METTL2AQ96IZ6 378 aaKnown RBP17.17■□□□□ 0.34
SFXN1-208ENST00000507823 CCDC115Q96NT0 180 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 TRIM8Q9BZR9 551 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 AGPAT4Q9NRZ5 378 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 HCN2Q9UL51 889 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 MAN2B2Q9Y2E5 1009 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 DOCK8Q8NF50 2099 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 EIF4E1BA6NMX2 242 aaKnown RBP17.17■□□□□ 0.34
SFXN1-208ENST00000507823 KCNH1O95259 989 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 PGRP06401 933 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 UBTFL6P0CB48 400 aaPredicted RBP17.17■□□□□ 0.34
SFXN1-208ENST00000507823 CASP2P42575 452 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 PDK3Q15120 406 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 TANGO2Q6ICL3 276 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 ERN2Q76MJ5 926 aaKnown RBP17.17■□□□□ 0.34
SFXN1-208ENST00000507823 THOC6Q86W42 341 aaKnown RBP17.17■□□□□ 0.34
SFXN1-208ENST00000507823 SFTPA1Q8IWL2 248 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 LILRA3Q8N6C8 439 aaPredicted RBP17.17■□□□□ 0.34
SFXN1-208ENST00000507823 TRPV3Q8NET8 790 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 WDR20Q8TBZ3 569 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 RAB7BQ96AH8 199 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 TESCQ96BS2 214 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 DLGAP4Q9Y2H0 992 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 AP3M1Q9Y2T2 418 aa17.17■□□□□ 0.34
SFXN1-208ENST00000507823 C17orf113A0A1B0GUU1 675 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 CD22P20273 847 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 ITPKAP23677 461 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 HRH2P25021 359 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 PSMA4P25789 261 aaKnown RBP17.16■□□□□ 0.34
SFXN1-208ENST00000507823 MAPK1P28482 360 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 RPS14P62263 151 aaKnown RBP17.16■□□□□ 0.34
SFXN1-208ENST00000507823 ABRQ12979 859 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 CHIT1Q13231 466 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 FAM174BQ3ZCQ3 159 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 AGTRAPQ6RW13 159 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 MSANTD1Q6ZTZ1 278 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 CPA6Q8N4T0 437 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 NUDT8Q8WV74 236 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 ZNF514Q96K75 400 aaPredicted RBP17.16■□□□□ 0.34
SFXN1-208ENST00000507823 MYCBPQ99417 103 aaPredicted RBP17.16■□□□□ 0.34
SFXN1-208ENST00000507823 ATG10Q9H0Y0 220 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 ZFP14Q9HCL3 533 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 COQ6Q9Y2Z9 468 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 AP4B1Q9Y6B7 739 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 H0YIV9 168 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 INPP4BO15327 924 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 LINGO3P0C6S8 592 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 HOXB9P17482 250 aaPredicted RBP17.16■□□□□ 0.34
SFXN1-208ENST00000507823 IL10P22301 178 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 IMPA1P29218 277 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 PREPP48147 710 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms