RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 FAM45AQ8TCE6 357 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 EEF1AKMT1Q8WVE0 214 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 IFT81Q8WYA0 676 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 RNF31Q96EP0 1072 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 ELMO2Q96JJ3 720 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 TRAPPC9Q96Q05 1148 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 RHOJQ9H4E5 214 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 NSMCE4AQ9NXX6 385 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 SLC39A10Q9ULF5 831 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 VWA7Q9Y334 891 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 NBEAQ8NFP9 2946 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 FAM208BQ5VWN6 2430 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 FAM95CA0A1B0GW59 222 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 GFYI3L273 518 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 POLR1CO15160 346 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 CATP04040 527 aaKnown RBP17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 ERGP11308 486 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 SKIV2L2P42285 1042 aaKnown RBP17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 TUBB3Q13509 450 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 FASTKQ14296 549 aaKnown RBP17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 KIR2DS3Q14952 304 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 EFTUD2Q15029 972 aaKnown RBP eCLIP17.62■□□□□ 0.411e-6■■■□□ 18.7
PDLIM7-216ENST00000506537 TGIF1Q15583 401 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 ZIC1Q15915 447 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 KBTBD12Q3ZCT8 623 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 TTC23LQ6PF05 361 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 TMEM207Q6UWW9 146 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 CEACAM20Q6UY09 585 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 OR9A1PQ8NGU1 263 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 HMGCLL1Q8TB92 370 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 FBF1Q8TES7 1133 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 DLG3Q92796 817 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 LINGO1Q96FE5 620 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 VPS39Q96JC1 886 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 TEFMQ96QE5 360 aaKnown RBP17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 FMO2Q99518 471 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 RAB11FIP5Q9BXF6 653 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 ASPSCR1Q9BZE9 553 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 SPRY4Q9C004 299 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 SOHLH2Q9NX45 425 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 NINJ2Q9NZG7 142 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 SPATA7Q9P0W8 599 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 MTRF1LQ9UGC7 380 aaKnown RBP17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 ADAMTS6Q9UKP5 1117 aa17.62■□□□□ 0.41
PDLIM7-216ENST00000506537 A0A0J9YY10 115 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 A0A1W2PPV9 198 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 ISM1B1AKI9 464 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 RRP8O43159 456 aaKnown RBP17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 PRICKLE3O43900 615 aaPredicted RBP17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 TIAF1O95411 115 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 RHOXF2BP0C7M4 288 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 LIPCP11150 499 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 FGF5P12034 268 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 CD82P27701 267 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 PSMB5P28074 263 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 ARL4DP49703 201 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 TAS2R39P59534 338 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 TLE3Q04726 772 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 PDAP1Q13442 181 aaKnown RBP17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 ZNF460Q14592 562 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 GPR19Q15760 415 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 CYP2A13Q16696 494 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 SLC5A12Q1EHB4 618 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 DTX1Q86Y01 620 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 RELL1Q8IUW5 271 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 FBXO15Q8NCQ5 510 aaPredicted RBP17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 MAGEC3Q8TD91 643 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 CDKL2Q92772 493 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 PKP4Q99569 1192 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 CPNE1Q99829 537 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 RHOXF2Q9BQY4 288 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 SSUH2Q9Y2M2 353 aa17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 MTO1Q9Y2Z2 717 aaKnown RBP17.61■□□□□ 0.41
PDLIM7-216ENST00000506537 ATRXP46100 2492 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 STMND1H3BQB6 276 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 KLK10O43240 276 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 ZNF500O60304 480 aaPredicted RBP17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 SPAG6O75602 509 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 FAM155BO75949 473 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 ZNF28P17035 718 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 SAT1P21673 171 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 STX2P32856 288 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 RGS4P49798 205 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 SRSF6Q13247 344 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 IL11RAQ14626 422 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 LRRC8EQ6NSJ5 796 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 LRRC69Q6ZNQ3 347 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 UBE2R2Q712K3 238 aaPredicted RBP17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 CEP97Q8IW35 865 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 C19orf47Q8N9M1 422 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 HNRNPLLQ8WVV9 542 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 ZNF501Q96CX3 271 aaPredicted RBP17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 CRELD1Q96HD1 420 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 RBBP8Q99708 897 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 ZPBPQ9BS86 351 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 DPH1Q9BZG8 443 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 CDC42EP4Q9H3Q1 356 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 FAM60AQ9NP50 221 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 FGF21Q9NSA1 209 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms