RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 A0A1W2PR64 198 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 FFAR2O15552 330 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 LIASO43766 372 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 PEX10O60683 326 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 GMNNO75496 209 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 MYO1DO94832 1006 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 TMEM63AO94886 807 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 GGPS1O95749 300 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 TOP3BO95985 862 aaKnown RBP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 CDC25AP30304 524 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 CALCRP30988 508 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 KRT2P35908 639 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 GSTM5P46439 218 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 HSPA7P48741 367 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 STAT2P52630 851 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 MAP3K7CLP57077 242 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 RAB4BP61018 213 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 ABATP80404 500 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 TLE2Q04725 743 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 MBTPS1Q14703 1052 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 PDK1Q15118 436 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 CUZD1Q86UP6 607 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 LGI2Q8N0V4 545 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 SLC44A3Q8N4M1 653 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 PLD5Q8N7P1 536 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 STPG3Q8N7X2 389 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 LEMD2Q8NC56 503 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 DENND6BQ8NEG7 585 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 OR10J5Q8NHC4 309 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 CEP76Q8TAP6 659 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 TSPEARQ8WU66 669 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 REPS1Q96D71 796 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 MRPL38Q96DV4 380 aaKnown RBP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 MAGEB18Q96M61 343 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 FOPNLQ96NB1 174 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 DDX23Q9BUQ8 820 aaKnown RBP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 SLC12A9Q9BXP2 914 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 POLD4Q9HCU8 107 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 SYBUQ9NX95 663 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 HSPBP1Q9NZL4 362 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 TMEM216Q9P0N5 145 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 GBF1Q92538 1859 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 SHISA8B8ZZ34 492 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 PRPF4O43172 522 aaKnown RBP eCLIP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 AVILO75366 819 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 MED24O75448 989 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 CRCPO75575 148 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 CDC123O75794 336 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 RAB3AP20336 220 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 DRD1P21728 446 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 SDHAP31040 664 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 EPHX2P34913 555 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 PAFAH1B1P43034 410 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 STARP49675 285 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 CSRP3P50461 194 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 YWHAEP62258 255 aaKnown RBP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 SPAG1Q07617 926 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 C2orf54Q08AI8 447 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 FCHO2Q0JRZ9 810 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 KCNMA1Q12791 1236 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 GAGE1Q13065 139 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 SLBPQ14493 270 aaKnown RBP eCLIP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 TRMT5Q32P41 509 aaKnown RBP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 LBHQ53QV2 105 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 AFMIDQ63HM1 303 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 ARL6IP4Q66PJ3 421 aaKnown RBP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 KRT74Q7RTS7 529 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 CAMKMTQ7Z624 323 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 LHFPL4Q7Z7J7 247 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 TAC4Q86UU9 113 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 MIB1Q86YT6 1006 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 CPOQ8IVL8 374 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 UBQLNLQ8IYU4 475 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 FRMD1Q8N878 549 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 PPP1R13LQ8WUF5 828 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 CSPG4P5Q96PW8 444 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 PKMYT1Q99640 499 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 HAPLN2Q9GZV7 340 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 GBA2Q9HCG7 927 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 NRBP2Q9NSY0 501 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 TRMT13Q9NUP7 481 aaKnown RBP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 BFARQ9NZS9 450 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 VPS54Q9P1Q0 977 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 EBF1Q9UH73 591 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 TRPS1Q9UHF7 1281 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 BCAP29Q9UHQ4 241 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 IPO11Q9UI26 975 aaKnown RBP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 CDH9Q9ULB4 789 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 CAPN11Q9UMQ6 739 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 TRAPPC4Q9Y296 219 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 DHRS7Q9Y394 339 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 GPR45Q9Y5Y3 372 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 ATP23Q9Y6H3 246 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 ANAPC1Q9H1A4 1944 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 VPS37CA5D8V6 355 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-205ENST00000506154 MFSD2BA6NFX1 497 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 FAM90A27PA6NNH2 459 aa2.22□□□□□ -2.05
NEDD4-205ENST00000506154 H0YIN7 160 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms