RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 LAIR1Q6GTX8 287 aa23.93■■□□□ 1.42
DDX41-202ENST00000503078 C17orf99Q6UX52 265 aa23.93■■□□□ 1.42
DDX41-202ENST00000503078 PLEKHG7Q6ZR37 379 aa23.93■■□□□ 1.42
DDX41-202ENST00000503078 NTMT1Q9BV86 223 aa23.93■■□□□ 1.42
DDX41-202ENST00000503078 ASPSCR1Q9BZE9 553 aa23.93■■□□□ 1.42
DDX41-202ENST00000503078 TNKS2Q9H2K2 1166 aa23.93■■□□□ 1.42
DDX41-202ENST00000503078 AASSQ9UDR5 926 aa23.93■■□□□ 1.42
DDX41-202ENST00000503078 SYN3O14994 580 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 MYCLP1P12525 358 aaPredicted RBP23.92■■□□□ 1.42
DDX41-202ENST00000503078 ZNF7P17097 686 aaPredicted RBP23.92■■□□□ 1.42
DDX41-202ENST00000503078 PSMB9P28065 219 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 SLC11A2P49281 568 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 DNASE1L3Q13609 305 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.92■■□□□ 1.421e-5■■■□□ 18
DDX41-202ENST00000503078 CRISPLD1Q9H336 500 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 LOC730098B7Z3J9 87 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 WNT9AO14904 365 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 DAPP51397 102 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 ARHGDIAP52565 204 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 IL1RL1Q01638 556 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 ABHD18Q0P651 414 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 DGCR6Q14129 220 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 GBX1Q14549 363 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 PHKG1Q16816 387 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 CLLU1OSQ5K130 101 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 CEP68Q76N32 757 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 SVOPQ8N4V2 548 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 USP7Q93009 1102 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 SPATA17Q96L03 361 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 BTBD2Q9BX70 525 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 SPC25Q9HBM1 224 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 SAMD4AQ9UPU9 718 aaKnown RBP23.92■■□□□ 1.42
DDX41-202ENST00000503078 GMPPBQ9Y5P6 360 aa23.92■■□□□ 1.42
DDX41-202ENST00000503078 GPC6Q9Y625 555 aaPredicted RBP23.92■■□□□ 1.42
DDX41-202ENST00000503078 MANSC4A6NHS7 340 aaPredicted RBP23.91■■□□□ 1.42
DDX41-202ENST00000503078 MT-ND2P03891 347 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 GSNP06396 782 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 HOXD12P35452 270 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 NCS1P62166 190 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 RPS14P62263 151 aaKnown RBP23.91■■□□□ 1.42
DDX41-202ENST00000503078 GTF2H3Q13889 308 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 LAPTM4AQ15012 233 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 INAVAQ3KP66 663 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 KDM4DQ6B0I6 523 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 NCEH1Q6PIU2 408 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 SNX20Q7Z614 316 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 LKAAEAR1Q8TD35 194 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 ULK4Q96C45 1275 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 APOL4Q9BPW4 351 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 GPR63Q9BZJ6 419 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 RMND5AQ9H871 391 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 PCDH12Q9NPG4 1184 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.91■■□□□ 1.42
DDX41-202ENST00000503078 RPS3P23396 243 aaKnown RBP eCLIP23.91■■□□□ 1.427e-10■■■■□ 20.3
DDX41-202ENST00000503078 DGKAP23743 735 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 S100A3P33764 101 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 ZNF157P51786 506 aaPredicted RBP23.91■■□□□ 1.42
DDX41-202ENST00000503078 MVKQ03426 396 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 ZNF177Q13360 481 aaPredicted RBP23.91■■□□□ 1.42
DDX41-202ENST00000503078 OR2T5Q6IEZ7 315 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 SERPINA9Q86WD7 417 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 ZNF540Q8NDQ6 660 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 OR2T29Q8NH02 315 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 UBTD2Q8WUN7 234 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 EID2BQ96D98 161 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 INPP5KQ9BT40 448 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 HERC2P3Q9BVR0 1158 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 ABCG2Q9UNQ0 655 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 VWA8A3KMH1 1905 aa23.91■■□□□ 1.42
DDX41-202ENST00000503078 MTMR11A4FU01 709 aa23.9■■□□□ 1.42
DDX41-202ENST00000503078 OR6C75A6NL08 312 aa23.9■■□□□ 1.42
DDX41-202ENST00000503078 RGS10O43665 173 aa23.9■■□□□ 1.42
DDX41-202ENST00000503078 CCNDBP1O95273 360 aa23.9■■□□□ 1.42
DDX41-202ENST00000503078 PRAMEF12O95522 483 aa23.9■■□□□ 1.42
DDX41-202ENST00000503078 FADS2O95864 444 aaKnown RBP23.9■■□□□ 1.42
DDX41-202ENST00000503078 HOXB9P17482 250 aaPredicted RBP23.9■■□□□ 1.42
DDX41-202ENST00000503078 CLDN8P56748 225 aa23.9■■□□□ 1.42
DDX41-202ENST00000503078 TWF1Q12792 350 aa23.9■■□□□ 1.42
DDX41-202ENST00000503078 HPS1Q92902 700 aa23.9■■□□□ 1.42
DDX41-202ENST00000503078 BOCQ9BWV1 1114 aa23.9■■□□□ 1.42
DDX41-202ENST00000503078 PARVBQ9HBI1 364 aa23.9■■□□□ 1.42
DDX41-202ENST00000503078 TM9SF3Q9HD45 589 aa23.9■■□□□ 1.42
DDX41-202ENST00000503078 ACOT13Q9NPJ3 140 aa23.9■■□□□ 1.42
DDX41-202ENST00000503078 DNMT3LQ9UJW3 386 aa23.9■■□□□ 1.42
DDX41-202ENST00000503078 PLXNA4Q9HCM2 1894 aa23.9■■□□□ 1.42
DDX41-202ENST00000503078 TTC34A8MYJ7 566 aa23.89■■□□□ 1.42
DDX41-202ENST00000503078 ZNF682O95780 498 aa23.89■■□□□ 1.42
DDX41-202ENST00000503078 EPB42P16452 691 aa23.89■■□□□ 1.42
DDX41-202ENST00000503078 HMGCLP35914 325 aa23.89■■□□□ 1.42
DDX41-202ENST00000503078 MRPL58Q14197 206 aaKnown RBP23.89■■□□□ 1.42
DDX41-202ENST00000503078 PGS1Q32NB8 556 aa23.89■■□□□ 1.42
DDX41-202ENST00000503078 PRSS48Q7RTY5 328 aa23.89■■□□□ 1.42
DDX41-202ENST00000503078 DENND1CQ8IV53 801 aa23.89■■□□□ 1.42
DDX41-202ENST00000503078 NACA2Q9H009 215 aa23.89■■□□□ 1.42
DDX41-202ENST00000503078 CCNB1IP1Q9NPC3 277 aa23.89■■□□□ 1.42
DDX41-202ENST00000503078 SLC25A14O95258 325 aaPredicted RBP23.89■■□□□ 1.41
DDX41-202ENST00000503078 NTRK1P04629 796 aa23.89■■□□□ 1.41
DDX41-202ENST00000503078 PTPN6P29350 595 aa23.89■■□□□ 1.41
DDX41-202ENST00000503078 ATP5C1P36542 298 aaKnown RBP23.89■■□□□ 1.41
DDX41-202ENST00000503078 SGSHP51688 502 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms