RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PMS2P2O95744 297 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 OLFM2O95897 454 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 SLC16A8O95907 504 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 GH1P01241 217 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 LIPFP07098 398 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 INHBAP08476 426 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 HNRNPCL4P0DMR1 293 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 HAPLN1P10915 354 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 ACP2P11117 423 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 ZNF23P17027 643 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 CD27P26842 260 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 CDC25AP30304 524 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 NR4A2P43354 598 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 CLK1P49759 484 aaKnown RBP5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 MTCP1P56278 107 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 INHBEP58166 350 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 ARF5P84085 180 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 EEF1A2Q05639 463 aaKnown RBP5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 NPRL3Q12980 569 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 KIR2DS5Q14953 304 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 LACTB2Q53H82 288 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 RAB12Q6IQ22 244 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 C11orf87Q6NUJ2 197 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 CYB5D1Q6P9G0 228 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 KMT5CQ86Y97 462 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 CFAP206Q8IYR0 622 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 RYBPQ8N488 228 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 TRIML1Q8N9V2 468 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 THAP8Q8NA92 274 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 PSMA8Q8TAA3 256 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 CCDC107Q8WV48 283 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 SEPT1Q8WYJ6 367 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 FIG4Q92562 907 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 PROX1Q92786 737 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 CENPTQ96BT3 561 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 ZNF385AQ96PM9 386 aaKnown RBP5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 SNX25Q9H3E2 840 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 UBTD1Q9HAC8 227 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 OCIAD1Q9NX40 245 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 AKAP7Q9P0M2 348 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 TRPC4Q9UBN4 977 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 FBXL5Q9UKA1 691 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 VDAC3Q9Y277 283 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 SMIM30A4D0T7 59 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 ZNF587BE7ETH6 402 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 PGRMC2O15173 223 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 ZBTB14O43829 449 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 GSRP00390 522 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 CRYABP02511 175 aaKnown RBP5□□□□□ -1.61
HMGB1P3-201ENST00000502802 ITGA2P17301 1181 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 CKMT2P17540 419 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 CBLP22681 906 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 CCND3P30281 292 aaPredicted RBP5□□□□□ -1.61
HMGB1P3-201ENST00000502802 CTNNB1P35222 781 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 AHRP35869 848 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 HMGA2P52926 109 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 NME5P56597 212 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 GSDMDP57764 484 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 KIAA1024LP59773 190 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 RELQ04864 619 aaPredicted RBP5□□□□□ -1.61
HMGB1P3-201ENST00000502802 DLG1Q12959 904 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 SLC39A14Q15043 492 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 NPTX1Q15818 432 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 DUOXA1Q1HG43 343 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 IQCCQ4KMZ1 466 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 ELFN2Q5R3F8 820 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 LCE3BQ5TA77 95 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 CNSTQ6PJW8 725 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 PACS1Q6VY07 963 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 SATL1Q86VE3 508 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 NUDT13Q86X67 352 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 DNAJC10Q8IXB1 793 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 GPALPP1Q8IXQ4 340 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 CRYBG2Q8N1P7 616 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 BMPERQ8N8U9 685 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 NPEPL1Q8NDH3 523 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 NCOA7Q8NI08 942 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 TMED6Q8WW62 240 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 SNRNP40Q96DI7 357 aaKnown RBP5□□□□□ -1.61
HMGB1P3-201ENST00000502802 ABHD8Q96I13 439 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 SGK494Q96LW2 274 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 SLC2A11Q9BYW1 496 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 LSG1Q9H089 658 aaKnown RBP5□□□□□ -1.61
HMGB1P3-201ENST00000502802 ARRDC1-AS1Q9H2J1 176 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 THAP9Q9H5L6 903 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 SRD5A3Q9H8P0 318 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 GKN1Q9NS71 199 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 TMEM161AQ9NX61 479 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 SLCO1C1Q9NYB5 712 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 PCDHA7Q9UN72 937 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 DLGAP4Q9Y2H0 992 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 HEG1Q9ULI3 1381 aa5□□□□□ -1.61
HMGB1P3-201ENST00000502802 CLEC18AA5D8T8 446 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 GAPDHSO14556 408 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 RNASEH1O60930 286 aaKnown RBP4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 PLGP00747 810 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 C9P02748 559 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 P4HA1P13674 534 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 HLA-DOBP13765 273 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms