RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 SMCHD1A6NHR9 2005 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 ZNF541Q9H0D2 1346 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 IGLV9-49A0A0B4J1Y8 123 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 LOC101059948A0A1B0GTJ6 334 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 ARHGEF37A1IGU5 675 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 URADA6NGE7 173 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 CLDN4O14493 209 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 EPHB6O15197 1021 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 DKC1O60832 514 aaKnown RBP eCLIP2.98□□□□□ -1.93
PSPC1-205ENST00000497722 ZG16O60844 167 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 RNASEH1O60930 286 aaKnown RBP2.98□□□□□ -1.93
PSPC1-205ENST00000497722 C22orf31O95567 290 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 TSHBP01222 138 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 ADRB2P07550 413 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 FDPSP14324 419 aaKnown RBP2.98□□□□□ -1.93
PSPC1-205ENST00000497722 AZGP1P25311 298 aaKnown RBP2.98□□□□□ -1.93
PSPC1-205ENST00000497722 VEGFCP49767 419 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 ASCL1P50553 236 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 LBX1P52954 281 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 HERV-K104P61576 105 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 RBPJQ06330 500 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 GPR17Q13304 367 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 VEZF1Q14119 521 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 KYNUQ16719 465 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 PHKG1Q16816 387 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 CRY2Q49AN0 593 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 MCMDC2Q4G0Z9 681 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 C20orf194Q5TEA3 1177 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 LCN1P1Q5VSP4 162 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 LINGO4Q6UY18 593 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 RTN4RL2Q86UN3 420 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 KRTAP7-1Q8IUC3 87 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 CEP57L1Q8IYX8 460 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 LGI2Q8N0V4 545 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 RAB42Q8N4Z0 105 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 WDSUB1Q8N9V3 476 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 TMEM178AQ8NBL3 297 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 CAMKVQ8NCB2 501 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 NPEPL1Q8NDH3 523 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 HCAR2Q8TDS4 363 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 SNRNP27Q8WVK2 155 aaKnown RBP2.98□□□□□ -1.93
PSPC1-205ENST00000497722 ROBO4Q8WZ75 1007 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 ARHGAP45Q92619 1136 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 ZNF524Q96C55 264 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 ZNF501Q96CX3 271 aaPredicted RBP2.98□□□□□ -1.93
PSPC1-205ENST00000497722 GIMAP5Q96F15 307 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 SIPA1Q96FS4 1042 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 MAGED4Q96JG8 741 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 RADILQ96JH8 1075 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 CFAP57Q96MR6 1250 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 F2RL3Q96RI0 385 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 BARHL1Q9BZE3 327 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 GFRA4Q9GZZ7 299 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 ZNF696Q9H7X3 374 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 XAB2Q9HCS7 855 aaKnown RBP2.98□□□□□ -1.93
PSPC1-205ENST00000497722 SIX2Q9NPC8 291 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 FGF21Q9NSA1 209 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 FAM207AQ9NSI2 230 aaPredicted RBP2.98□□□□□ -1.93
PSPC1-205ENST00000497722 TXNDC16Q9P2K2 825 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 WDR35Q9P2L0 1181 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 C19orf25Q9UFG5 118 aaPredicted RBP2.98□□□□□ -1.93
PSPC1-205ENST00000497722 ABT1Q9ULW3 272 aaKnown RBP2.98□□□□□ -1.93
PSPC1-205ENST00000497722 TNNQ9UQP3 1299 aa2.98□□□□□ -1.93
PSPC1-205ENST00000497722 MRPS28Q9Y2Q9 187 aaKnown RBP2.98□□□□□ -1.93
PSPC1-205ENST00000497722 NOTCH2Q04721 2471 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 NEMP2A6NFY4 417 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 TRIM77I1YAP6 450 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 PSMD14O00487 310 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 ATP6V0E1O15342 81 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 EDIL3O43854 480 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 RPS6KA5O75582 802 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 CDC123O75794 336 aaPredicted RBP2.97□□□□□ -1.93
PSPC1-205ENST00000497722 SLCO2B1O94956 709 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 ACSL3O95573 720 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 CLPTM1O96005 669 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 NGFP01138 241 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 APOHP02749 345 aaPredicted RBP2.97□□□□□ -1.93
PSPC1-205ENST00000497722 PRSS56P0CW18 603 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 PRKAR1AP10644 381 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 IRF2P14316 349 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 EFNA1P20827 205 aaPredicted RBP2.97□□□□□ -1.93
PSPC1-205ENST00000497722 CA6P23280 308 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 CSTF2P33240 577 aaKnown RBP eCLIP2.97□□□□□ -1.93
PSPC1-205ENST00000497722 KLC1Q07866 573 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 CUL3Q13618 768 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 HNRNPDQ14103 355 aaKnown RBP2.97□□□□□ -1.93
PSPC1-205ENST00000497722 COG2Q14746 738 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 UGP2Q16851 508 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 VWC2Q2TAL6 325 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 ITPRIPL2Q3MIP1 535 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 SYT14P1Q58G82 188 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 KRBOX4Q5JUW0 171 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 CYP4A22Q5TCH4 519 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 ARHGAP11AQ6P4F7 1023 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 SLC16A9Q7RTY1 509 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 NUP54Q7Z3B4 507 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 CCDC186Q7Z3E2 898 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 TMPRSS11BQ86T26 416 aa2.97□□□□□ -1.93
PSPC1-205ENST00000497722 TLK2Q86UE8 772 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms