RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	BORA	Q6PGQ7	559 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	FAM198B	Q6UWH4	519 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	RANBP10	Q6VN20	620 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	ZNF517	Q6ZMY9	492 aa	Predicted RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	ATG14	Q6ZNE5	492 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	FAM92B	Q6ZTR7	304 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	SLC9B2	Q86UD5	537 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	GAS2L3	Q86XJ1	694 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	TRAPPC5	Q8IUR0	188 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	MAP7D3	Q8IWC1	876 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	PIANP	Q8IYJ0	282 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	ACTL9	Q8TC94	416 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	LKAAEAR1	Q8TD35	194 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	BLOC1S5	Q8TDH9	187 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	ADAMTS17	Q8TE56	1095 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	TFB1M	Q8WVM0	346 aa	Known RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	ZNF501	Q96CX3	271 aa	Predicted RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	ZNF830	Q96NB3	372 aa	Predicted RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	OR6C1	Q96RD1	312 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	MAP3K3	Q99759	626 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	HEMGN	Q9BXL5	484 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	ADGRE3	Q9BY15	652 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	GPR63	Q9BZJ6	419 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	RAB33B	Q9H082	229 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	KLHL25	Q9H0H3	589 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	WWP1	Q9H0M0	922 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	SLC25A18	Q9H1K4	315 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	ADNP	Q9H2P0	1102 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	TSPY26P	Q9H489	355 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	EPB41L1	Q9H4G0	881 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	CLMP	Q9H6B4	373 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	ZNF552	Q9H707	407 aa	Predicted RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	DDX56	Q9NY93	547 aa	Known RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	WHRN	Q9P202	907 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	IMPACT	Q9P2X3	320 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	EPHA6	Q9UF33	1036 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	FAM153A	Q9UHL3	310 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	PSMD13	Q9UNM6	376 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	TP53TG5	Q9Y2B4	290 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	SF3B6	Q9Y3B4	125 aa	Known RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	PRSS21	Q9Y6M0	314 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	CROCC	Q5TZA2	2017 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	CSMD2	Q7Z408	3487 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	GLYATL1P3	A0A0U1RQE8	302 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	OR5K3	A6NET4	321 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	OR51F1	A6NGY5	319 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	OR5K4	A6NMS3	321 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	PDZK1P1	A8MUH7	402 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	AKR1B15	C9JRZ8	316 aa	Predicted RBP	5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	NPIPB6	E9PJ23	425 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	BTN3A3	O00478	584 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	SPOP	O43791	374 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	CNOT3	O75175	753 aa	Known RBP	5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	PPFIA2	O75334	1257 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	SPAG6	O75602	509 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	POP7	O75817	140 aa	Known RBP	5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	CDK14	O94921	469 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	NDUFA10	O95299	355 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	EPO	P01588	193 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	PYGM	P11217	842 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	PRKCA	P17252	672 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	HLA-DPA1	P20036	260 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	ITGAX	P20702	1163 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	CFP	P27918	469 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	PBLD	P30039	288 aa	Predicted RBP	5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	RORA	P35398	523 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	SLC1A1	P43005	524 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	MAGEA1	P43355	309 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	NR2C2	P49116	596 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	PRLHR	P49683	370 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	CSRP3	P50461	194 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	MPP3	Q13368	585 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	DNASE1L3	Q13609	305 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	SPARCL1	Q14515	664 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	SEMA3A	Q14563	771 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	GPR19	Q15760	415 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	ZIC1	Q15915	447 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	IGFBP7	Q16270	282 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	DEFB109B	Q30KR1	87 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	METRNL	Q641Q3	311 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	FAM199X	Q6PEV8	388 aa	Predicted RBP	5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	TMEM220	Q6QAJ8	160 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	VHLL	Q6RSH7	139 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	CEACAM20	Q6UY09	585 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	DET1	Q7L5Y6	550 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	GLT6D1	Q7Z4J2	308 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	PRUNE1	Q86TP1	453 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	NDUFAF2	Q8N183	169 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	D2HGDH	Q8N465	521 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	LMNTD1	Q8N9Z9	388 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368		Q8NA96	180 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	GLIS1	Q8NBF1	620 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	NUP43	Q8NFH3	380 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	OR4K2	Q8NGD2	314 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	CCDC110	Q8TBZ0	833 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	CCHCR1	Q8TD31	782 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	MIB2	Q96AX9	1013 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	ELMO2	Q96JJ3	720 aa		5.35	□□□□□ -1.55
UBE3C-208	ENST00000497368	DNAJC1	Q96KC8	554 aa	Known RBP	5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms