RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 KCNC3Q14003 757 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 MAP7Q14244 749 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 CBX2Q14781 532 aaPredicted RBP12.71□□□□□ -0.37
GARNL3-220ENST00000496711 CNPY1Q3B7I2 92 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 SLC44A4Q53GD3 710 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 TCEAL5Q5H9L2 206 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 ZNF648Q5T619 568 aaPredicted RBP12.71□□□□□ -0.37
GARNL3-220ENST00000496711 KRT80Q6KB66 452 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 ERAP2Q6P179 960 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 PARS2Q7L3T8 475 aaKnown RBP12.71□□□□□ -0.37
GARNL3-220ENST00000496711 TECPR1Q7Z6L1 1165 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 CELF5Q8N6W0 485 aaKnown RBP12.71□□□□□ -0.37
GARNL3-220ENST00000496711 TNIP2Q8NFZ5 429 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 CLHC1Q8NHS4 586 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 BTN2A2Q8WVV5 523 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 GLMNQ92990 594 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 GLYATL1Q969I3 302 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 CMTM7Q96FZ5 175 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 FAM83CQ9BQN1 747 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 PNPLA3Q9NST1 481 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 OAZ3Q9UMX2 235 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 SLC22A14Q9Y267 594 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 TMED5Q9Y3A6 229 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 MRPS23Q9Y3D9 190 aaKnown RBP12.71□□□□□ -0.37
GARNL3-220ENST00000496711 MYOCOSA0A1B0GUC4 107 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 KRT87PA6NCN2 255 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 NPIPB8E9PQR5 432 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 PDLIM1O00151 329 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 HOXC11O43248 304 aaPredicted RBP12.7□□□□□ -0.38
GARNL3-220ENST00000496711 ATG13O75143 517 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 PSIP1O75475 530 aaKnown RBP12.7□□□□□ -0.38
GARNL3-220ENST00000496711 GMNNO75496 209 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 ADH1CP00326 375 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 LDLRP01130 860 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 POU2F2P09086 479 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 CISD3P0C7P0 127 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 MAP4P27816 1152 aaKnown RBP12.7□□□□□ -0.38
GARNL3-220ENST00000496711 HALP42357 657 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 PRLHRP49683 370 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 CLDN8P56748 225 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 ST8SIA6P61647 398 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 POM121L1PQ3SYA9 428 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 DNAJC14Q6Y2X3 702 aaPredicted RBP12.7□□□□□ -0.38
GARNL3-220ENST00000496711 ZNF366Q8N895 744 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 OR2T12Q8NG77 320 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 DNAJB8Q8NHS0 232 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 TFAP2CQ92754 450 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 ZNF707Q96C28 371 aaPredicted RBP12.7□□□□□ -0.38
GARNL3-220ENST00000496711 ZNF583Q96ND8 569 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 OR52E6Q96RD3 313 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 SEPHS2Q99611 448 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 SH3GL1Q99961 368 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 ATG10Q9H0Y0 220 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 FAM8A1Q9UBU6 413 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 DLGAP4Q9Y2H0 992 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 AP3M1Q9Y2T2 418 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 V9GYQ6 96 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 RNF103-CHMP3A0A140T963 221 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 SERTM1A2A2V5 107 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 EME2A4GXA9 379 aaPredicted RBP12.7□□□□□ -0.38
GARNL3-220ENST00000496711 TMEM202A6NGA9 273 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 ARHGEF33A8MVX0 844 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 C5orf67F2Z3F1 127 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 PSMD11O00231 422 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 ACOX3O15254 700 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 TSPAN6O43657 245 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 UGDHO60701 494 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 TFAP2AP05549 437 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 JUPP14923 745 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 ACPPP15309 386 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 ATP6V1B1P15313 513 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 PCSK2P16519 638 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 NEK2P51955 445 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 PFN3P60673 137 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 CHIT1Q13231 466 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 CAMK1Q14012 370 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 ACOX1Q15067 660 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.7□□□□□ -0.38
GARNL3-220ENST00000496711 FRG2Q64ET8 278 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 LIPIQ6XZB0 460 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 CYP2U1Q7Z449 544 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 SPRED2Q7Z698 418 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 C12orf40Q86WS4 652 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 MSRB3Q8IXL7 192 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 RASGEF1AQ8N9B8 481 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 ZNF548Q8NEK5 533 aaPredicted RBP12.7□□□□□ -0.38
GARNL3-220ENST00000496711 ITFG1Q8TB96 612 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 PHOSPHO2Q8TCD6 241 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 BPIFB1Q8TDL5 484 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 TMEM159Q96B96 161 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 AP2M1Q96CW1 435 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 RNF145Q96MT1 663 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 FRG2BQ96QU4 278 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 ADI1Q9BV57 179 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 SLC25A37Q9NYZ2 338 aa12.7□□□□□ -0.38
GARNL3-220ENST00000496711 KIF26AQ9ULI4 1882 aaPredicted RBP12.69□□□□□ -0.38
GARNL3-220ENST00000496711 COL4A3Q01955 1670 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 MKI67P46013 3256 aaKnown RBP12.69□□□□□ -0.38
GARNL3-220ENST00000496711 TRBV5-3A0A0A0MS03 114 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 ENO4A6NNW6 628 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms