RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 TCF25Q9BQ70 676 aa11.25□□□□□ -0.61
CDCA7-208ENST00000496441 PCDH12Q9NPG4 1184 aa11.25□□□□□ -0.61
CDCA7-208ENST00000496441 NEUROG3Q9Y4Z2 214 aa11.25□□□□□ -0.61
CDCA7-208ENST00000496441 TRBV5-4A0A0C4DH59 114 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 ELOVL7A1L3X0 281 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 MYO1GB0I1T2 1018 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 G3V2T6 193 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 H0YJX3 145 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 SLC28A1O00337 649 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 CXCR6O00574 342 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 AXIN1O15169 862 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 HS6ST1O60243 411 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 MAN1A2O60476 641 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 PRAMEF4O60810 478 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 DEAF1O75398 565 aaPredicted RBP11.24□□□□□ -0.61
CDCA7-208ENST00000496441 OLFM2O95897 454 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 ASLP04424 464 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 EBLN1P0CF75 366 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 CDH1P12830 882 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 CYP4B1P13584 511 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 GGT1P19440 569 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 CD9P21926 228 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 XPAP23025 273 aaPredicted RBP11.24□□□□□ -0.61
CDCA7-208ENST00000496441 MYF6P23409 242 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 SPINT3P49223 89 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 ERVFC1P60507 584 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 CTBSQ01459 385 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 GTF2H3Q13889 308 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 KIAA0040Q15053 153 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 CARD16Q5EG05 197 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 PRAMEF9Q5VWM5 478 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 DOK6Q6PKX4 331 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 ABRAXAS1Q6UWZ7 409 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 ANGPTL8Q6UXH0 198 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 TMC8Q8IU68 726 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 DPP10Q8N608 796 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 SDCCAG3Q96C92 435 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 MYOCQ99972 504 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 HERC2P3Q9BVR0 1158 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 RIOK2Q9BVS4 552 aaKnown RBP11.24□□□□□ -0.61
CDCA7-208ENST00000496441 SEZ6LQ9BYH1 1024 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 PAK6Q9NQU5 681 aaPredicted RBP11.24□□□□□ -0.61
CDCA7-208ENST00000496441 TMCO1Q9UM00 188 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 COQ6Q9Y2Z9 468 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 ST14Q9Y5Y6 855 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 MYO15AQ9UKN7 3530 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 PTGES3LE9PB15 166 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 PLK4O00444 970 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 ABCB1P08183 1280 aaPredicted RBP11.24□□□□□ -0.61
CDCA7-208ENST00000496441 RAP2AP10114 183 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 ATP1B2P14415 290 aaPredicted RBP11.24□□□□□ -0.61
CDCA7-208ENST00000496441 AQP1P29972 269 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 SHMT2P34897 504 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 TMEM215Q68D42 235 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 ZNF621Q6ZSS3 439 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 KCTD8Q6ZWB6 473 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 CYP2U1Q7Z449 544 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 SPRED1Q7Z699 444 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 C2orf73Q8N5S3 287 aaPredicted RBP11.24□□□□□ -0.61
CDCA7-208ENST00000496441 MFSD2AQ8NA29 543 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 FRS2Q8WU20 508 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 ZNF689Q96CS4 500 aaPredicted RBP11.24□□□□□ -0.61
CDCA7-208ENST00000496441 CEP295NLQ96MC4 621 aa11.24□□□□□ -0.61
CDCA7-208ENST00000496441 DPH2Q9BQC3 489 aaPredicted RBP11.24□□□□□ -0.61
CDCA7-208ENST00000496441 NINQ8N4C6 2090 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 A0A087WXM4 84 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 GFRA2O00451 464 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 NTRK1P04629 796 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 PABPC1P11940 636 aaKnown RBP11.23□□□□□ -0.61
CDCA7-208ENST00000496441 METAP1P53582 386 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 IRF8Q02556 426 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 BIRC2Q13490 618 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 GRIN2CQ14957 1233 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 USP39Q53GS9 565 aaKnown RBP11.23□□□□□ -0.61
CDCA7-208ENST00000496441 XKR6Q5GH73 641 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 TMEM26Q6ZUK4 368 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 ANKRD33Q7Z3H0 272 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 ZNF548Q8NEK5 533 aaPredicted RBP11.23□□□□□ -0.61
CDCA7-208ENST00000496441 OR2A12Q8NGT7 310 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 VOPP1Q96AW1 172 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 TOR3AQ9H497 397 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 PPT2Q9UMR5 302 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 PCDHGA11Q9Y5H2 935 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 TRIOO75962 3097 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 COL4A6Q14031 1691 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 OBSL1O75147 1896 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 NOTCH4Q99466 2003 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 SAP18O00422 153 aaKnown RBP11.23□□□□□ -0.61
CDCA7-208ENST00000496441 PER2O15055 1255 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 POP4O95707 220 aaKnown RBP11.23□□□□□ -0.61
CDCA7-208ENST00000496441 UMPSP11172 480 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 PIGAP37287 484 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 MAPK8P45983 427 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 BDKRB1P46663 353 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 GSSP48637 474 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 FAM180BQ6P0A1 224 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 GDPD4Q6W3E5 623 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 TMEM179BQ7Z7N9 219 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 RBM23Q86U06 439 aaKnown RBP11.23□□□□□ -0.61
CDCA7-208ENST00000496441 PAWRQ96IZ0 340 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms