RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 CDKL3Q8IVW4 592 aaPredicted RBP16.85■□□□□ 0.29
TMEM53-209ENST00000495630 KLHDC8BQ8IXV7 354 aa16.85■□□□□ 0.29
TMEM53-209ENST00000495630 PIANPQ8IYJ0 282 aa16.85■□□□□ 0.29
TMEM53-209ENST00000495630 BCORP1Q8N888 145 aa16.85■□□□□ 0.29
TMEM53-209ENST00000495630 STYXQ8WUJ0 223 aa16.85■□□□□ 0.29
TMEM53-209ENST00000495630 ELMO1Q92556 727 aa16.85■□□□□ 0.29
TMEM53-209ENST00000495630 RELTQ969Z4 430 aa16.85■□□□□ 0.29
TMEM53-209ENST00000495630 CNDP1Q96KN2 507 aa16.85■□□□□ 0.29
TMEM53-209ENST00000495630 SPSB2Q99619 263 aa16.85■□□□□ 0.29
TMEM53-209ENST00000495630 SLX1AQ9BQ83 275 aa16.85■□□□□ 0.29
TMEM53-209ENST00000495630 LUC7LQ9NQ29 371 aaKnown RBP16.85■□□□□ 0.29
TMEM53-209ENST00000495630 ENAMQ9NRM1 1142 aa16.85■□□□□ 0.29
TMEM53-209ENST00000495630 SEMA3GQ9NS98 782 aa16.85■□□□□ 0.29
TMEM53-209ENST00000495630 COPG2Q9UBF2 871 aa16.85■□□□□ 0.29
TMEM53-209ENST00000495630 PRSS44E7EML9 344 aa16.84■□□□□ 0.29
TMEM53-209ENST00000495630 DSCR3O14972 297 aa16.84■□□□□ 0.29
TMEM53-209ENST00000495630 KCNN4O15554 427 aa16.84■□□□□ 0.29
TMEM53-209ENST00000495630 PRSS56P0CW18 603 aa16.84■□□□□ 0.29
TMEM53-209ENST00000495630 PEBP1P30086 187 aaKnown RBP16.84■□□□□ 0.29
TMEM53-209ENST00000495630 OTUD4Q01804 1114 aaKnown RBP16.84■□□□□ 0.29
TMEM53-209ENST00000495630 ART3Q13508 389 aa16.84■□□□□ 0.29
TMEM53-209ENST00000495630 SPARCL1Q14515 664 aa16.84■□□□□ 0.29
TMEM53-209ENST00000495630 ITIH4Q14624 930 aa16.84■□□□□ 0.29
TMEM53-209ENST00000495630 BRD3Q15059 726 aa16.84■□□□□ 0.29
TMEM53-209ENST00000495630 TUBB8Q3ZCM7 444 aa16.84■□□□□ 0.29
TMEM53-209ENST00000495630 ZC3H12BQ5HYM0 836 aaKnown RBP16.84■□□□□ 0.29
TMEM53-209ENST00000495630 DARS2Q6PI48 645 aaKnown RBP16.84■□□□□ 0.29
TMEM53-209ENST00000495630 FAM180AQ6UWF9 173 aa16.84■□□□□ 0.29
TMEM53-209ENST00000495630 MCEMP1Q8IX19 187 aa16.84■□□□□ 0.29
TMEM53-209ENST00000495630 ACTL9Q8TC94 416 aa16.84■□□□□ 0.29
TMEM53-209ENST00000495630 SLC22A18Q96BI1 424 aa16.84■□□□□ 0.29
TMEM53-209ENST00000495630 THOC3Q96J01 351 aaKnown RBP16.84■□□□□ 0.29
TMEM53-209ENST00000495630 SPATA13Q96N96 652 aa16.84■□□□□ 0.29
TMEM53-209ENST00000495630 PRSS21Q9Y6M0 314 aa16.84■□□□□ 0.29
TMEM53-209ENST00000495630 CCDC78A2IDD5 438 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 ALOX12BO75342 701 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 JRKO75564 520 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 ZNF189O75820 626 aaPredicted RBP16.83■□□□□ 0.28
TMEM53-209ENST00000495630 RBP3P10745 1247 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 PSMA3P25788 255 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 MARCKSL1P49006 195 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 RIPPLY3P57055 190 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 EIF3EP60228 445 aaKnown RBP16.83■□□□□ 0.28
TMEM53-209ENST00000495630 MFAP5Q13361 173 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 GRM7Q14831 915 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 DNAJC21Q5F1R6 531 aaKnown RBP16.83■□□□□ 0.28
TMEM53-209ENST00000495630 TCTE1Q5JU00 501 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 CROCCQ5TZA2 2017 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 PACS1Q6VY07 963 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 COX15Q7KZN9 410 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 FJX1Q86VR8 437 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 CATSPER1Q8NEC5 780 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 OR11G2Q8NGC1 345 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 CCDC110Q8TBZ0 833 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 ALS2CR12Q96Q35 445 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 GOLPH3Q9H4A6 298 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 IGSF5Q9NSI5 407 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 CUTCQ9NTM9 273 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 OLAHQ9NV23 265 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 INTS7Q9NVH2 962 aaKnown RBP16.83■□□□□ 0.28
TMEM53-209ENST00000495630 PLAGL1Q9UM63 463 aa16.83■□□□□ 0.28
TMEM53-209ENST00000495630 APCP25054 2843 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 VSTM2BA6NLU5 285 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 F8W8V4 182 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 CBFA2T2O43439 604 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 OR56A5P0C7T3 313 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 TPH1P17752 444 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 MAGP20916 626 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 CTNNA2P26232 953 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 RAB28P51157 221 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 Q0VFX4 171 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 RBBP7Q16576 425 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 PARP6Q2NL67 630 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 FAM214AQ32MH5 1076 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 SYTL3Q4VX76 610 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 KCTD11Q693B1 232 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 ZNF324BQ6AW86 544 aaPredicted RBP16.82■□□□□ 0.28
TMEM53-209ENST00000495630 LINC00696Q6ZRV3 163 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 FAM20CQ8IXL6 584 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 OR1N1Q8NGS0 311 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 KRT35Q92764 455 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 TRIM56Q9BRZ2 755 aaKnown RBP16.82■□□□□ 0.28
TMEM53-209ENST00000495630 KLHL20Q9Y2M5 609 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 KLF2Q9Y5W3 355 aaPredicted RBP16.82■□□□□ 0.28
TMEM53-209ENST00000495630 ZGRF1Q86YA3 2104 aa16.82■□□□□ 0.28
TMEM53-209ENST00000495630 CSMD1Q96PZ7 3565 aa16.81■□□□□ 0.28
TMEM53-209ENST00000495630 FITM1A5D6W6 292 aa16.81■□□□□ 0.28
TMEM53-209ENST00000495630 SRPX2O60687 465 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-209ENST00000495630 MFAP3LO75121 409 aa16.81■□□□□ 0.28
TMEM53-209ENST00000495630 KLHL18O94889 574 aa16.81■□□□□ 0.28
TMEM53-209ENST00000495630 S1PR4O95977 384 aa16.81■□□□□ 0.28
TMEM53-209ENST00000495630 CD9P21926 228 aa16.81■□□□□ 0.28
TMEM53-209ENST00000495630 PKLRP30613 574 aa16.81■□□□□ 0.28
TMEM53-209ENST00000495630 MAGEA1P43355 309 aa16.81■□□□□ 0.28
TMEM53-209ENST00000495630 CARSP49589 748 aaKnown RBP16.81■□□□□ 0.28
TMEM53-209ENST00000495630 FIGLAQ6QHK4 219 aa16.81■□□□□ 0.28
TMEM53-209ENST00000495630 NAPRTQ6XQN6 538 aa16.81■□□□□ 0.28
TMEM53-209ENST00000495630 MICALCLQ6ZW33 695 aa16.81■□□□□ 0.28
TMEM53-209ENST00000495630 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-209ENST00000495630 ZUFSPQ96AP4 578 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms