RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ILF2Q12905 390 aaKnown RBP18.79■□□□□ 0.6
HDAC4-212ENST00000495497 ZKSCAN8Q15776 578 aaPredicted RBP18.79■□□□□ 0.6
HDAC4-212ENST00000495497 PHKG1Q16816 387 aa18.79■□□□□ 0.6
HDAC4-212ENST00000495497 SPESP1Q6UW49 350 aa18.79■□□□□ 0.6
HDAC4-212ENST00000495497 UNQ6494/PRO21346Q6UXR6 183 aa18.79■□□□□ 0.6
HDAC4-212ENST00000495497 MBOAT1Q6ZNC8 495 aa18.79■□□□□ 0.6
HDAC4-212ENST00000495497 NKAPQ8N5F7 415 aaKnown RBP18.79■□□□□ 0.6
HDAC4-212ENST00000495497 FBXO15Q8NCQ5 510 aaPredicted RBP18.79■□□□□ 0.6
HDAC4-212ENST00000495497 PPFIBP2Q8ND30 876 aa18.79■□□□□ 0.6
HDAC4-212ENST00000495497 KLHL6Q8WZ60 621 aa18.79■□□□□ 0.6
HDAC4-212ENST00000495497 PMEPA1Q969W9 287 aa18.79■□□□□ 0.6
HDAC4-212ENST00000495497 TWSG1Q9GZX9 223 aa18.79■□□□□ 0.6
HDAC4-212ENST00000495497 POPDC3Q9HBV1 291 aa18.79■□□□□ 0.6
HDAC4-212ENST00000495497 SPATA7Q9P0W8 599 aa18.79■□□□□ 0.6
HDAC4-212ENST00000495497 SEMA5BQ9P283 1151 aa18.79■□□□□ 0.6
HDAC4-212ENST00000495497 PCDHGA8Q9Y5G5 932 aa18.79■□□□□ 0.6
HDAC4-212ENST00000495497 KIF26BQ2KJY2 2108 aa18.79■□□□□ 0.6
HDAC4-212ENST00000495497 EXOC1LA0A1B0GW35 172 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 NPEPPSL1A6NEC2 478 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 MATN2O00339 956 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 C8GP07360 202 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 INHBAP08476 426 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 ST6GAL1P15907 406 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 CYP2A7P20853 494 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 PSMB5P28074 263 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 GCAP28676 217 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 KCNAB1Q14722 419 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 WDR93Q6P2C0 686 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 DCAKDQ8WVC6 231 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 UBLCP1Q8WVY7 318 aaPredicted RBP18.78■□□□□ 0.6
HDAC4-212ENST00000495497 USP7Q93009 1102 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 PDLIM5Q96HC4 596 aaKnown RBP18.78■□□□□ 0.6
HDAC4-212ENST00000495497 SLC46A1Q96NT5 459 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 CD180Q99467 661 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 CTRCQ99895 268 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 SLC12A9Q9BXP2 914 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 PARD6BQ9BYG5 372 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 PARVBQ9HBI1 364 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 LNPEPQ9UIQ6 1025 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 KLHL20Q9Y2M5 609 aa18.78■□□□□ 0.6
HDAC4-212ENST00000495497 A0A1W2PPV9 198 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 SLC16A5O15375 505 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 SLC16A8O95907 504 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 CCDC166P0CW27 439 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 NELFEP18615 380 aaKnown RBP18.77■□□□□ 0.6
HDAC4-212ENST00000495497 RBMS1P29558 406 aaKnown RBP18.77■□□□□ 0.6
HDAC4-212ENST00000495497 PNLIPRP1P54315 467 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 SP140Q13342 867 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 TSTA3Q13630 321 aaPredicted RBP18.77■□□□□ 0.6
HDAC4-212ENST00000495497 KIR2DS3Q14952 304 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 CYP2A13Q16696 494 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 ANKS6Q68DC2 871 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 SUSD1Q6UWL2 747 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 RAPH1Q70E73 1250 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 RAB42Q8N4Z0 105 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 BMPERQ8N8U9 685 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 MCOLN3Q8TDD5 553 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 ZNF480Q8WV37 535 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.77■□□□□ 0.68e-7■■■■■ 64.2
HDAC4-212ENST00000495497 RNF31Q96EP0 1072 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 SLC41A2Q96JW4 573 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 TRAPPC9Q96Q05 1148 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 RAB11FIP5Q9BXF6 653 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 CCDC86Q9H6F5 360 aaKnown RBP18.77■□□□□ 0.6
HDAC4-212ENST00000495497 APMAPQ9HDC9 416 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 ASCL3Q9NQ33 180 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 C1GALT1Q9NS00 363 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 ABCF3Q9NUQ8 709 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 SIDT1Q9NXL6 827 aaKnown RBP18.77■□□□□ 0.6
HDAC4-212ENST00000495497 SLC39A1Q9NY26 324 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 IKBKGQ9Y6K9 419 aa18.77■□□□□ 0.6
HDAC4-212ENST00000495497 PRICKLE3O43900 615 aaPredicted RBP18.76■□□□□ 0.59
HDAC4-212ENST00000495497 CAPNS1P04632 268 aa18.76■□□□□ 0.59
HDAC4-212ENST00000495497 EBLN1P0CF75 366 aa18.76■□□□□ 0.59
HDAC4-212ENST00000495497 SLC35E2BP0CK96 405 aa18.76■□□□□ 0.59
HDAC4-212ENST00000495497 ERGP11308 486 aa18.76■□□□□ 0.59
HDAC4-212ENST00000495497 FOLR1P15328 257 aa18.76■□□□□ 0.59
HDAC4-212ENST00000495497 IMPA1P29218 277 aa18.76■□□□□ 0.59
HDAC4-212ENST00000495497 ARL4DP49703 201 aa18.76■□□□□ 0.59
HDAC4-212ENST00000495497 YBX1P67809 324 aaKnown RBP18.76■□□□□ 0.59
HDAC4-212ENST00000495497 DLG1Q12959 904 aa18.76■□□□□ 0.59
HDAC4-212ENST00000495497 CSHL1Q14406 222 aa18.76■□□□□ 0.59
HDAC4-212ENST00000495497 TSNQ15631 228 aaKnown RBP18.76■□□□□ 0.59
HDAC4-212ENST00000495497 HMGCLL1Q8TB92 370 aa18.76■□□□□ 0.59
HDAC4-212ENST00000495497 ACAT2Q9BWD1 397 aa18.76■□□□□ 0.59
HDAC4-212ENST00000495497 PITPNM3Q9BZ71 974 aa18.76■□□□□ 0.59
HDAC4-212ENST00000495497 RRAGDQ9NQL2 400 aaPredicted RBP18.76■□□□□ 0.59
HDAC4-212ENST00000495497 SNX15Q9NRS6 342 aa18.76■□□□□ 0.59
HDAC4-212ENST00000495497 SOHLH2Q9NX45 425 aa18.76■□□□□ 0.59
HDAC4-212ENST00000495497 UTP6Q9NYH9 597 aaKnown RBP18.76■□□□□ 0.59
HDAC4-212ENST00000495497 CTNNAL1Q9UBT7 734 aa18.76■□□□□ 0.59
HDAC4-212ENST00000495497 A0A0J9YY10 115 aa18.75■□□□□ 0.59
HDAC4-212ENST00000495497 B4E171 279 aa18.75■□□□□ 0.59
HDAC4-212ENST00000495497 C9orf172C9J069 976 aa18.75■□□□□ 0.59
HDAC4-212ENST00000495497 ZBTB11O95625 1053 aaPredicted RBP18.75■□□□□ 0.59
HDAC4-212ENST00000495497 GUCA1CO95843 209 aa18.75■□□□□ 0.59
HDAC4-212ENST00000495497 ALDOAP04075 364 aaKnown RBP18.75■□□□□ 0.59
HDAC4-212ENST00000495497 SHBGP04278 402 aa18.75■□□□□ 0.59
HDAC4-212ENST00000495497 CD1DP15813 335 aa18.75■□□□□ 0.59
HDAC4-212ENST00000495497 CRABP2P29373 138 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms