RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 SPESP1Q6UW49 350 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 TMEM179BQ7Z7N9 219 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 TBC1D21Q8IYX1 336 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 MFSD2AQ8NA29 543 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 TSPEARQ8WU66 669 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 MED8Q96G25 268 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 PAWRQ96IZ0 340 aaKnown RBP12.13□□□□□ -0.47
HMGN1-220ENST00000492280 LMLNQ96KR4 655 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 WRAP53Q9BUR4 548 aaKnown RBP12.13□□□□□ -0.47
HMGN1-220ENST00000492280 SEZ6LQ9BYH1 1024 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 EPB41L1Q9H4G0 881 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 C1orf109Q9NX04 203 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 PTTG2Q9NZH5 202 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 CXXC1Q9P0U4 656 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-220ENST00000492280 PCDHB3Q9Y5E6 796 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 CTSLP07711 333 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 CDH1P12830 882 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 SDC1P18827 310 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 MYF6P23409 242 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 POLR2IP36954 125 aaKnown RBP12.13□□□□□ -0.47
HMGN1-220ENST00000492280 RPS14P62263 151 aaKnown RBP12.13□□□□□ -0.47
HMGN1-220ENST00000492280 ILF2Q12905 390 aaKnown RBP12.13□□□□□ -0.47
HMGN1-220ENST00000492280 RIMKLAQ8IXN7 391 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 OR7A2PQ8NGA2 310 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 NETO1Q8TDF5 533 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 BPIFB1Q8TDL5 484 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 ECHDC3Q96DC8 303 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 HIC2Q96JB3 615 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 NRTNQ99748 197 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 MYOCQ99972 504 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 DPH2Q9BQC3 489 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-220ENST00000492280 RIOK2Q9BVS4 552 aaKnown RBP12.13□□□□□ -0.47
HMGN1-220ENST00000492280 MAGEL2Q9UJ55 1249 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 SLC25A13Q9UJS0 675 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 HS3ST2Q9Y278 367 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 H0YJX3 145 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 TSPAN6O43657 245 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 EBLN1P0CF75 366 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 AOAHP28039 575 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 ARSFP54793 590 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 FOXD4Q12950 439 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-220ENST00000492280 PMS2P3Q13401 168 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 GRIN2CQ14957 1233 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 C16orf72Q14CZ0 275 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 GPR33Q49SQ1 333 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 AASDHQ4L235 1098 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-220ENST00000492280 LRRC23Q53EV4 343 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-220ENST00000492280 CYP2U1Q7Z449 544 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 ADIPOR2Q86V24 386 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 CPXM2Q8N436 756 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 BARD1Q99728 777 aaKnown RBP12.12□□□□□ -0.47
HMGN1-220ENST00000492280 SLC32A1Q9H598 525 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 CLMPQ9H6B4 373 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 RSL24D1Q9UHA3 163 aaKnown RBP12.12□□□□□ -0.47
HMGN1-220ENST00000492280 KNL1Q8NG31 2342 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 E7EQ34 232 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 CXCR6O00574 342 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 PARNO95453 639 aaKnown RBP12.12□□□□□ -0.47
HMGN1-220ENST00000492280 SERPINA1P01009 418 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 CST1P01037 141 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 OR56A5P0C7T3 313 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 CTSAP10619 480 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 EEF1B2P24534 225 aaKnown RBP12.12□□□□□ -0.47
HMGN1-220ENST00000492280 CAPGP40121 348 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 IL1RL1Q01638 556 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 CHRNB3Q05901 458 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 CHIT1Q13231 466 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.12□□□□□ -0.47
HMGN1-220ENST00000492280 SFTPA1Q8IWL2 248 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 USP7Q93009 1102 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 SLC47A1Q96FL8 570 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 ZFYVE19Q96K21 471 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 HAUS8Q9BT25 410 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 NTMT1Q9BV86 223 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 PCDH12Q9NPG4 1184 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 SERHLQ9NQF3 203 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 TRPS1Q9UHF7 1281 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 TMCO1Q9UM00 188 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 ERVK-11Q9UQG0 969 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 PCDHGA11Q9Y5H2 935 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 PCM1Q15154 2024 aa12.12□□□□□ -0.47
HMGN1-220ENST00000492280 AGAP14A8MT82 685 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 ARNTLO00327 626 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 PER2O15055 1255 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 MOSPD3O75425 235 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 GBAP04062 536 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 ATP1B2P14415 290 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-220ENST00000492280 NR4A1P22736 598 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 PDHA2P29803 388 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 ALDH3B2P48448 385 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 SPIDRQ14159 915 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 TMEM259Q4ZIN3 620 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 GDPD4Q6W3E5 623 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 CLECL1Q8IZS7 167 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 GPR156Q8NFN8 814 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 OSCP1Q8WVF1 389 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 TOX2Q96NM4 488 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 SAMD11Q96NU1 681 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 MCCC1Q96RQ3 725 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-220ENST00000492280 POLR1BQ9H9Y6 1135 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms