RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 BRD3Q15059 726 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 RPS6KA1Q15418 735 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 TYSND1Q2T9J0 566 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 NADK2Q4G0N4 442 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 NKAIN1Q4KMZ8 207 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 FASTKD1Q53R41 847 aaKnown RBP8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 CRB2Q5IJ48 1285 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 AARS2Q5JTZ9 985 aaKnown RBP8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 SEL1L2Q5TEA6 688 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 JMJD6Q6NYC1 403 aaPredicted RBP8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 PPP1R21Q6ZMI0 780 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 MRGPREQ86SM8 312 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 MCATQ8IVS2 390 aaKnown RBP8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 DCUN1D3Q8IWE4 304 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 GPR135Q8IZ08 494 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 FAM26EQ8N5C1 309 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 RBMXL3Q8N7X1 1067 aaKnown RBP8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 LMNTD1Q8N9Z9 388 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 Q8NA96 180 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 OR2Y1Q8NGV0 311 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 OR2L8Q8NGY9 312 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 ZUFSPQ96AP4 578 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 SLC22A18Q96BI1 424 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 PTERQ96BW5 349 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 BARD1Q99728 777 aaKnown RBP8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 NUDT9Q9BW91 350 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 IL22Q9GZX6 179 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 SLC26A1Q9H2B4 701 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 ACSS2Q9NR19 701 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 EURLQ9NYK6 297 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 GUCA1BQ9UMX6 200 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 SRPK3Q9UPE1 567 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 ZNF451Q9Y4E5 1061 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 SPENQ96T58 3664 aaKnown RBP8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 C9J4A7 227 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 E7EVH7 732 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 RASGRF2O14827 1237 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 KPNA5O15131 536 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 C1orf105O95561 183 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 S1PR4O95977 384 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 ALBP02768 609 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 RPN2P04844 631 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 APOA4P06727 396 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 UMODP07911 640 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 TPSB2P20231 275 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 MAGP20916 626 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 NMBRP28336 390 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 ATP5DP30049 168 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 PRAMEP78395 509 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 DCDP81605 110 aaKnown RBP8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 HSPA14Q0VDF9 509 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 SNX1Q13596 522 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 ATP1A4Q13733 1029 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 TPSAB1Q15661 275 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 SYTL3Q4VX76 610 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 DCAF10Q5QP82 559 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 YOD1Q5VVQ6 348 aaPredicted RBP8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 FCRL6Q6DN72 434 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 LRRC8BQ6P9F7 803 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 PPP1R32Q7Z5V6 425 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 LDB1Q86U70 411 aaPredicted RBP8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 TMEM151BQ8IW70 566 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 ZNF655Q8N720 491 aaPredicted RBP8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 CCDC89Q8N998 374 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 SPC24Q8NBT2 197 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 PPHLN1Q8NEY8 458 aaKnown RBP8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 OR6P1Q8NGX9 317 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 DENND1AQ8TEH3 1009 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 LPGAT1Q92604 370 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 FKBP10Q96AY3 582 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 TCF12Q99081 682 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 TSSK1BQ9BXA7 367 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 WDR54Q9H977 334 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 CATSPERZQ9NTU4 200 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 BFARQ9NZS9 450 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 PLAGL1Q9UM63 463 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 SOX13Q9UN79 622 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 PADI2Q9Y2J8 665 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 TDRKHQ9Y2W6 561 aaKnown RBP8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 NEU2Q9Y3R4 380 aa8.05□□□□□ -1.12
SMARCB1-207ENST00000491967 UTP20O75691 2785 aaKnown RBP8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 A0A1W2PPV9 198 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 VSTM2BA6NLU5 285 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 ISM1B1AKI9 464 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 SRPX2O60687 465 aaPredicted RBP8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 DPM1O60762 260 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 CTSVO60911 334 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 IGHEP01854 428 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 ERGP11308 486 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 MMP11P24347 488 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 VARSP26640 1264 aaKnown RBP8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 GRIA3P42263 894 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 ARSFP54793 590 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 EMP3P54852 163 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 CRADDP78560 199 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 RELAQ04206 551 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 KCNJ11Q14654 390 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 CYP2A13Q16696 494 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 DEFB110Q30KQ9 67 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 CTSL3PQ5NE16 218 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms