RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 DNASE1L3Q13609 305 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 KRT33BQ14525 404 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 BRD3Q15059 726 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 PLCL1Q15111 1095 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 TRADDQ15628 312 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 DBN1Q16643 649 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 BCL7AQ4VC05 210 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 CRTC2Q53ET0 693 aaPredicted RBP10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 METRNLQ641Q3 311 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 FAM199XQ6PEV8 388 aaPredicted RBP10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 ZDHHC24Q6UX98 284 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 CLEC18BQ6UXF7 455 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 BPHLQ86WA6 291 aaPredicted RBP10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 PPP1R3BQ86XI6 285 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 CILP2Q8IUL8 1156 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 RELL1Q8IUW5 271 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 PIANPQ8IYJ0 282 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 CFAP206Q8IYR0 622 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 CLEC18CQ8NCF0 446 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 OR2L2Q8NH16 312 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 APOBEC4Q8WW27 367 aaKnown RBP10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 ASZ1Q8WWH4 475 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 LINC00615Q96LM1 132 aaPredicted RBP10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 C12orf66Q96MD2 445 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 CCDC77Q9BR77 488 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 LHX9Q9NQ69 397 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 ZDHHC18Q9NUE0 388 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 ARGLU1Q9NWB6 273 aaPredicted RBP10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 MOCS1Q9NZB8 636 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 NFU1Q9UMS0 254 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 SPTBP11277 2137 aa10.7□□□□□ -0.7
TMEM39A-211ENST00000491685 MED13Q9UHV7 2174 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 GOLGA8KD6RF30 607 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 GOLGA8TH3BQL2 631 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 IFRD1O00458 451 aaPredicted RBP10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 TP73O15350 636 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 MAP3K7O43318 606 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 DNAJB5O75953 348 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 APOA4P06727 396 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 CCNYL3P0C7X3 344 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 ERVK-10P10266 1014 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 RPS3P23396 243 aaKnown RBP eCLIP10.69□□□□□ -0.75e-7■□□□□ 10.4
TMEM39A-211ENST00000491685 CASRP41180 1078 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 SKIV2L2P42285 1042 aaKnown RBP10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 PRLHRP49683 370 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 ARL4DP49703 201 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 KPNA2P52292 529 aaKnown RBP10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 FOXK1P85037 733 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 RPA4Q13156 261 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 CTBP1Q13363 440 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 IL10RAQ13651 578 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 TMED2Q15363 201 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 GPR19Q15760 415 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 LACTB2Q53H82 288 aaPredicted RBP10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 TEDDM1Q5T9Z0 273 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 LGSNQ5TDP6 509 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 PRAMEF17Q5VTA0 474 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 CPZQ66K79 652 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 STEAP4Q687X5 459 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 ZNF470Q6ECI4 717 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 TRMT10CQ7L0Y3 403 aaKnown RBP10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 SLC26A11Q86WA9 606 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 IGDCC3Q8IVU1 814 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 SIDT2Q8NBJ9 832 aaKnown RBP10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 HM13Q8TCT9 377 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 TRIM55Q9BYV6 548 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 ACTL8Q9H568 366 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 PDE7BQ9NP56 450 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 SLC24A2Q9UI40 661 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 KCND3Q9UK17 655 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 RARRES3Q9UL19 164 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 CRYL1Q9Y2S2 319 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 PCDHGA6Q9Y5G7 932 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 IKBKGQ9Y6K9 419 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 COLEC10Q9Y6Z7 277 aa10.69□□□□□ -0.7
TMEM39A-211ENST00000491685 OR6C74A6NCV1 312 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 TLCD2A6NGC4 264 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 DYNC1I1O14576 645 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 LIN7AO14910 233 aaPredicted RBP10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 KDM1AO60341 852 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 BANF1O75531 89 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 CREG1O75629 220 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 S1PR4O95977 384 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 PKMP14618 531 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 SSTR1P30872 391 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 PMS2P54278 862 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 SLC12A2P55011 1212 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 EIF3BP55884 814 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 GPS2Q13227 327 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 KYNUQ16719 465 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 TYSND1Q2T9J0 566 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 TTLL9Q3SXZ7 439 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 ZNF658BQ4V348 819 aaPredicted RBP10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 FAM69BQ5VUD6 431 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 CAPRIN2Q6IMN6 1127 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 LCN10Q6JVE6 187 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 EMBQ6PCB8 327 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 TTC23LQ6PF05 361 aa10.68□□□□□ -0.7
TMEM39A-211ENST00000491685 OTOAQ7RTW8 1153 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms