RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 YOD1Q5VVQ6 348 aaPredicted RBP8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 PRAMEF13Q5VWM6 474 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 RPUSD3Q6P087 351 aaKnown RBP8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 DARS2Q6PI48 645 aaKnown RBP8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 MYO7BQ6PIF6 2116 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 PACS1Q6VY07 963 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 NAPRTQ6XQN6 538 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 KCNMB4Q86W47 210 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 CDKL3Q8IVW4 592 aaPredicted RBP8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 PIANPQ8IYJ0 282 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 CLDN19Q8N6F1 224 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 OR5AR1Q8NGP9 310 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 OR5K2Q8NHB8 316 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 DLG3Q92796 817 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 N4BP2L2Q92802 583 aaPredicted RBP8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 CDKN2AIPNLQ96HQ2 116 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 DNAJC1Q96KC8 554 aaKnown RBP8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 SPATA13Q96N96 652 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 ZNF285Q96NJ3 590 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 TBL1YQ9BQ87 522 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 TMEM121Q9BTD3 319 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 HGH1Q9BTY7 390 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 ZBTB20Q9HC78 741 aaPredicted RBP8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 LUC7LQ9NQ29 371 aaKnown RBP8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 SPHK1Q9NYA1 384 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 MAP10Q9P2G4 905 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 NDOR1Q9UHB4 597 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 ENTPD4Q9Y227 616 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 CDYLQ9Y232 598 aa8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.13□□□□□ -1.11
APOBEC3F-204ENST00000491387 A0A1B0GX78 115 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 FITM1A5D6W6 292 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 MROH6A6NGR9 719 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 BTNL10A8MVZ5 291 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 SOCS6O14544 535 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 KDM1AO60341 852 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 STK10O94804 968 aaKnown RBP8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 FKBP9O95302 570 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 FTH1P02794 183 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 CTSBP07858 339 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 STSP08842 583 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 PIM1P11309 404 aaPredicted RBP8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 EDN3P14138 238 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 ITGA3P26006 1051 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 ARSFP54793 590 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 PER3P56645 1201 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 POU6F1Q14863 301 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 ZRSR2Q15696 482 aaKnown RBP8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 DBN1Q16643 649 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 CYP2A13Q16696 494 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 CCDC38Q502W7 563 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 DNAJC21Q5F1R6 531 aaKnown RBP8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 C1orf189Q5VU69 101 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 FCRL6Q6DN72 434 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 OVCH1Q7RTY7 1134 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 PEX26Q7Z412 305 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 TRIM73Q86UV7 250 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 HOOK3Q86VS8 718 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 ZNF655Q8N720 491 aaPredicted RBP8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 FAM71DQ8N9W8 422 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 LMNTD1Q8N9Z9 388 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 STYXQ8WUJ0 223 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 FAR1Q8WVX9 515 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 ANP32BQ92688 251 aaKnown RBP8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 LRRC45Q96CN5 670 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 HES6Q96HZ4 224 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 CALR3Q96L12 384 aaKnown RBP8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 SPSB2Q99619 263 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 SLX1AQ9BQ83 275 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 TRIM56Q9BRZ2 755 aaKnown RBP8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 NDC1Q9BTX1 674 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 MENTQ9BUN1 341 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 MRM3Q9HC36 420 aaKnown RBP8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 TXLNGQ9NUQ3 528 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 EURLQ9NYK6 297 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 IL1RAPL1Q9NZN1 696 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 DHCR7Q9UBM7 475 aaKnown RBP8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 NXT1Q9UKK6 140 aaKnown RBP8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 AMFRQ9UKV5 643 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 NOVA2Q9UNW9 492 aaKnown RBP8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 ASF1AQ9Y294 204 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 PRSS21Q9Y6M0 314 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 CCDC168Q8NDH2 2452 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 PCNX1Q96RV3 2341 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 CROCCQ5TZA2 2017 aa8.12□□□□□ -1.11
APOBEC3F-204ENST00000491387 PDZD2O15018 2839 aa8.11□□□□□ -1.11
APOBEC3F-204ENST00000491387 VSTM2BA6NLU5 285 aa8.11□□□□□ -1.11
APOBEC3F-204ENST00000491387 DSCR3O14972 297 aa8.11□□□□□ -1.11
APOBEC3F-204ENST00000491387 HNRNPRO43390 633 aaKnown RBP8.11□□□□□ -1.11
APOBEC3F-204ENST00000491387 F7P08709 466 aaPredicted RBP8.11□□□□□ -1.11
APOBEC3F-204ENST00000491387 ZSCAN5DPP0CG00 497 aa8.11□□□□□ -1.11
APOBEC3F-204ENST00000491387 PEBP1P30086 187 aaKnown RBP8.11□□□□□ -1.11
APOBEC3F-204ENST00000491387 CDC25BP30305 580 aa8.11□□□□□ -1.11
APOBEC3F-204ENST00000491387 PKLRP30613 574 aa8.11□□□□□ -1.11
APOBEC3F-204ENST00000491387 GLRBP48167 497 aa8.11□□□□□ -1.11
APOBEC3F-204ENST00000491387 RAB28P51157 221 aa8.11□□□□□ -1.11
APOBEC3F-204ENST00000491387 SNX1Q13596 522 aa8.11□□□□□ -1.11
APOBEC3F-204ENST00000491387 TLR1Q15399 786 aa8.11□□□□□ -1.11
APOBEC3F-204ENST00000491387 SIX1Q15475 284 aaPredicted RBP8.11□□□□□ -1.11
APOBEC3F-204ENST00000491387 NKG7Q16617 165 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms