RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 NAGAP17050 411 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 MAOAP21397 527 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 UBA1P22314 1058 aaKnown RBP4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 CPT2P23786 658 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 EEF1DP29692 281 aaKnown RBP4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 RPL3P39023 403 aaKnown RBP4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 RFX5P48382 616 aaPredicted RBP4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 ST3GAL1Q11201 340 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 BAATQ14032 418 aaPredicted RBP4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 PXDC1Q5TGL8 231 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 DCLRE1AQ6PJP8 1040 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 TMEM184AQ6ZMB5 413 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 TAOK1Q7L7X3 1001 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 CACNA2D4Q7Z3S7 1137 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 TSPAN33Q86UF1 283 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 ZC3HC1Q86WB0 502 aaKnown RBP4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 DUSP19Q8WTR2 217 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 APBB2Q92870 758 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 ORAI1Q96D31 301 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 SPATA17Q96L03 361 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 SORCS2Q96PQ0 1159 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 KLHL5Q96PQ7 755 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 SMC6Q96SB8 1091 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 KXD1Q9BQD3 176 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 HAUS8Q9BT25 410 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 MRPL1Q9BYD6 325 aaKnown RBP4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 SPRTNQ9H040 489 aaPredicted RBP4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 SPATC1LQ9H0A9 340 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 FAM234AQ9H0X4 552 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 FOXP1Q9H334 677 aaPredicted RBP4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 SEBOXQ9HB31 216 aaPredicted RBP4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 EXO1Q9UQ84 846 aaKnown RBP4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 PCDHGA5Q9Y5G8 931 aa4.78□□□□□ -1.64
SSX2IP-208ENST00000490476 APCP25054 2843 aa4.78□□□□□ -1.65
SSX2IP-208ENST00000490476 ASTN1O14525 1302 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 LOC102723996A0A087X1L8 192 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 IGLV5-39A0A0G2JS06 123 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 KANSL1LA0AUZ9 987 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 CGB1A6NKQ9 187 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 PLPP2O43688 288 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 TADA2AO75478 443 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 PCCAP05165 728 aaPredicted RBP4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 TPOP07202 933 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 EIF2S2P20042 333 aaKnown RBP4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 GNLYP22749 145 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 TBXAS1P24557 533 aaPredicted RBP4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 HNRNPH1P31943 449 aaKnown RBP4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 RASSF2P50749 326 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 ADORA2A-AS1P86434 159 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 GRIK2Q13002 908 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 SRSF5Q13243 272 aaKnown RBP4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 SNTB1Q13884 538 aaKnown RBP4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 IL11RAQ14626 422 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 NONOQ15233 471 aaKnown RBP eCLIP4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 TAF7Q15545 349 aaPredicted RBP4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 FSCBQ5H9T9 825 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 C6orf163Q5TEZ5 329 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 OTUD1Q5VV17 481 aaPredicted RBP4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 KRT79Q5XKE5 535 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 TCEAL6Q6IPX3 200 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 KRT80Q6KB66 452 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 DUS1LQ6P1R4 473 aaKnown RBP4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 SHQ1Q6PI26 577 aaKnown RBP4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 PRIMA1Q86XR5 153 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 EPHX4Q8IUS5 362 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 Q8NFD4 153 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 OR1J2Q8NGS2 313 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 MPLKIPQ8TAP9 179 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 HMGCLL1Q8TB92 370 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 P2RX5Q93086 422 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 TCEAL3Q969E4 200 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 ZNF653Q96CK0 615 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 WBP1Q96G27 269 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 GRAMD2BQ96HH9 432 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 DDOQ99489 341 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 RTN4RQ9BZR6 473 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 GOLPH3LQ9H4A5 285 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 TAS2R14Q9NYV8 317 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 PTGFRNQ9P2B2 879 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 STK39Q9UEW8 545 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 ZNF148Q9UQR1 794 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 INSL5Q9Y5Q6 135 aa4.77□□□□□ -1.65
SSX2IP-208ENST00000490476 ADGRA3Q8IWK6 1321 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 F5P12259 2224 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 GPR75-ASB3A0A0A6YYF3 556 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 A0A1B0GVT2 93 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 RPS10-NUDT3A0A1W2PQS6 291 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 TRBC2A0A5B9 178 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 VWA5AO00534 786 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 SMAD9O15198 467 aaKnown RBP4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 TBCAO75347 108 aaKnown RBP4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 SNAI1O95863 264 aaPredicted RBP4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 GJA1P17302 382 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 DNASE1P24855 282 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 BDKRB2P30411 391 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 STX2P32856 288 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 HMGA2P52926 109 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 TTC3P53804 2025 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 STARD6P59095 220 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 CSNK2A1P68400 391 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms