RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 HMCESQ96FZ2 354 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 MS4A12Q9NXJ0 267 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 ZFP37Q9Y6Q3 630 aaPredicted RBP8.67□□□□□ -1.02
LSAMP-205ENST00000490035 SP2Q02086 613 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 DAG1Q14118 895 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 TIGD6Q17RP2 521 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 IRF2BP1Q8IU81 584 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 TMEM139Q8IV31 216 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 ZNF781Q8N8C0 355 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 OR10A6Q8NH74 314 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 NMUR1Q9HB89 426 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 REXO2Q9Y3B8 237 aaKnown RBP8.67□□□□□ -1.02
LSAMP-205ENST00000490035 M0QX08 132 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 WNT9AO14904 365 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 SERINC3Q13530 473 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 UGCGQ16739 394 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 SMU1Q2TAY7 513 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 SNAP47Q5SQN1 464 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 TMEM145Q8NBT3 493 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 ZNF358Q9NW07 568 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 MTMR10Q9NXD2 777 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 HES2Q9Y543 173 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 YES1P07947 543 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 LINGO3P0C6S8 592 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 GADD45AP24522 165 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 XKP51811 444 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 C6orf52Q5T4I8 152 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 SYCE2Q6PIF2 218 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 SRMSQ9H3Y6 488 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 GON4LQ3T8J9 2241 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 ZNF432O94892 652 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 IFNA21P01568 189 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 GSTT2P0CG29 244 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 SP100P23497 879 aaPredicted RBP8.67□□□□□ -1.02
LSAMP-205ENST00000490035 ITPKAP23677 461 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 CXorf57Q6NSI4 855 aaKnown RBP8.67□□□□□ -1.02
LSAMP-205ENST00000490035 TIGD4Q8IY51 512 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 CFAP52Q8N1V2 620 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 OR56A1Q8NGH5 318 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 EXOC2Q96KP1 924 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.67□□□□□ -1.02
LSAMP-205ENST00000490035 U3KQV3 271 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 TSPAN8P19075 237 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 NFKB2Q00653 900 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 ST3GAL3Q11203 375 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 MAP1SQ66K74 1059 aaPredicted RBP8.67□□□□□ -1.02
LSAMP-205ENST00000490035 TMEM110Q86TL2 294 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 CAND1Q86VP6 1230 aaKnown RBP8.67□□□□□ -1.02
LSAMP-205ENST00000490035 ZNF433Q8N7K0 673 aaPredicted RBP8.67□□□□□ -1.02
LSAMP-205ENST00000490035 PCDHB18PQ96TA0 734 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 EQTNQ9NQ60 294 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 SCML2Q9UQR0 700 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 ATRNL1Q5VV63 1379 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 SCDO00767 359 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 OR3A3P47888 321 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 OR3A2P47893 321 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 ZNF234Q14588 700 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 ECM1Q16610 540 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 FOXR1Q6PIV2 292 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 POLR2J3Q9H1A7 115 aaKnown RBP8.67□□□□□ -1.02
LSAMP-205ENST00000490035 MIR1-1HGQ9H1L0 117 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 FZD8Q9H461 694 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 IL36AQ9UHA7 158 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 CNOT6Q9ULM6 557 aaKnown RBP8.67□□□□□ -1.02
LSAMP-205ENST00000490035 H0YGN5 161 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 CSNK2A2P19784 350 aaPredicted RBP8.66□□□□□ -1.02
LSAMP-205ENST00000490035 SNTA1Q13424 505 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 PDSS1Q5T2R2 415 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 OR2T5Q6IEZ7 315 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 OR2T29Q8NH02 315 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 HAVCR2Q8TDQ0 301 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 GLS2Q9UI32 602 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 PLEKHA6Q9Y2H5 1048 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 DAPL1A0PJW8 107 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 PFKMP08237 780 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 RPL10P27635 214 aaKnown RBP8.66□□□□□ -1.02
LSAMP-205ENST00000490035 TSPAN5P62079 268 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 GALNT5Q7Z7M9 940 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 LPPQ93052 612 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 SHDQ96IW2 340 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 GATA5Q9BWX5 397 aaPredicted RBP8.66□□□□□ -1.02
LSAMP-205ENST00000490035 TMEM45AQ9NWC5 275 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 C10orf71Q711Q0 1435 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 A0A0G2JLL6 359 aaPredicted RBP8.66□□□□□ -1.02
LSAMP-205ENST00000490035 KANTRA0A1W2PQU2 76 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 SLC38A8A6NNN8 435 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 LGR5O75473 907 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 EPHX1P07099 455 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 PIRTP0C851 137 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 MAP3K8P41279 467 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 ATXN1P54253 815 aaKnown RBP8.66□□□□□ -1.02
LSAMP-205ENST00000490035 ASB18Q6ZVZ8 466 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 PRRT2Q7Z6L0 340 aaPredicted RBP8.66□□□□□ -1.02
LSAMP-205ENST00000490035 OR2L3Q8NG85 312 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 C1orf216Q8TAB5 229 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 EXOSC8Q96B26 276 aaKnown RBP8.66□□□□□ -1.02
LSAMP-205ENST00000490035 LRIG1Q96JA1 1093 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 NDC1Q9BTX1 674 aa8.66□□□□□ -1.02
LSAMP-205ENST00000490035 POLR2J2Q9GZM3 115 aaKnown RBP8.66□□□□□ -1.02
LSAMP-205ENST00000490035 RSPH9Q9H1X1 276 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms