RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 XKR8Q9H6D3 395 aa10.72□□□□□ -0.69
CPSF7-212ENST00000489728 KLHL3Q9UH77 587 aa10.72□□□□□ -0.69
CPSF7-212ENST00000489728 NOVA2Q9UNW9 492 aaKnown RBP10.72□□□□□ -0.69
CPSF7-212ENST00000489728 A0A087WUV0 522 aaPredicted RBP10.71□□□□□ -0.69
CPSF7-212ENST00000489728 IGHV5-51A0A0C4DH38 117 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 A0A0J9YY10 115 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 CCDC189A1A4V9 331 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 EFCAB7A8K855 629 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 A8MU76 341 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 KIF1CO43896 1103 aaKnown RBP10.71□□□□□ -0.69
CPSF7-212ENST00000489728 SLU7O95391 586 aaKnown RBP10.71□□□□□ -0.69
CPSF7-212ENST00000489728 CCL4P13236 92 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 UGT2B7P16662 529 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 STMN1P16949 149 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 CNTFP26441 200 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 SLC26A3P40879 764 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 ABCG1P45844 678 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 BDKRB1P46663 353 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 ARL4DP49703 201 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 AP1S2P56377 157 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 TAS2R39P59534 338 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 PPP1CAP62136 330 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 ZKSCAN8Q15776 578 aaPredicted RBP10.71□□□□□ -0.69
CPSF7-212ENST00000489728 UBE2R2Q712K3 238 aaPredicted RBP10.71□□□□□ -0.69
CPSF7-212ENST00000489728 TAOK1Q7L7X3 1001 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 LINC01555Q8NAE3 123 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 LRRN4CLQ8ND94 238 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 ZNF248Q8NDW4 579 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 FLVCR1-AS1Q8TAF5 88 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 MDM1Q8TC05 714 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 DENND1AQ8TEH3 1009 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 SMPDL3AQ92484 453 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 TCTN2Q96GX1 697 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 TRIM54Q9BYV2 358 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 DPH1Q9BZG8 443 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 PARVBQ9HBI1 364 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 PDE7BQ9NP56 450 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 INTS7Q9NVH2 962 aaKnown RBP10.71□□□□□ -0.69
CPSF7-212ENST00000489728 SLC39A1Q9NY26 324 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.71□□□□□ -0.69
CPSF7-212ENST00000489728 RUVBL2Q9Y230 463 aaKnown RBP10.71□□□□□ -0.69
CPSF7-212ENST00000489728 KLK4Q9Y5K2 254 aa10.71□□□□□ -0.69
CPSF7-212ENST00000489728 KIF26BQ2KJY2 2108 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 PMS2P1A4D2B8 440 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 PABPN1LA6NDY0 278 aaKnown RBP10.7□□□□□ -0.7
CPSF7-212ENST00000489728 POLR1CO15160 346 aaPredicted RBP10.7□□□□□ -0.7
CPSF7-212ENST00000489728 PRICKLE3O43900 615 aaPredicted RBP10.7□□□□□ -0.7
CPSF7-212ENST00000489728 CCNDBP1O95273 360 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 WISP3O95389 354 aaPredicted RBP10.7□□□□□ -0.7
CPSF7-212ENST00000489728 ACSL3O95573 720 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 SLC16A8O95907 504 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 FGF5P12034 268 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 HGFP14210 728 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 ITIH1P19827 911 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 CCND1P24385 295 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 CRABP2P29373 138 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 OAS2P29728 719 aaKnown RBP10.7□□□□□ -0.7
CPSF7-212ENST00000489728 SLC5A2P31639 672 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 ETV5P41161 510 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 SERPINB9P50453 376 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 MAPK10P53779 464 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 PMS2P54278 862 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 PNLIPRP1P54315 467 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 RAB10P61026 200 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 USP10Q14694 798 aaKnown RBP10.7□□□□□ -0.7
CPSF7-212ENST00000489728 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.7□□□□□ -0.7
CPSF7-212ENST00000489728 FOXR1Q6PIV2 292 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 ADAMTSL2Q86TH1 951 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 C19orf47Q8N9M1 422 aaKnown RBP10.7□□□□□ -0.7
CPSF7-212ENST00000489728 LMNTD1Q8N9Z9 388 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 SLC44A1Q8WWI5 657 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 USP7Q93009 1102 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 CCDC138Q96M89 665 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 CNTNAP3BQ96NU0 1288 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 TRAPPC9Q96Q05 1148 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 PKP4Q99569 1192 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 CNTNAP3Q9BZ76 1288 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 TXLNGYQ9BZA5 131 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 DERL2Q9GZP9 239 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 FANCEQ9HB96 536 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 GPAMQ9HCL2 828 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 OCIAD1Q9NX40 245 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 SOHLH2Q9NX45 425 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 SPHK1Q9NYA1 384 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 ANKMY1Q9P2S6 941 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 FETUBQ9UGM5 382 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 ZNF180Q9UJW8 692 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 PLAGL1Q9UM63 463 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 IGF2RP11717 2491 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 ASPMQ8IZT6 3477 aa10.7□□□□□ -0.7
CPSF7-212ENST00000489728 A0A087WV48 116 aa10.69□□□□□ -0.7
CPSF7-212ENST00000489728 SLC9B1P1A6NJY1 282 aa10.69□□□□□ -0.7
CPSF7-212ENST00000489728 ISM1B1AKI9 464 aa10.69□□□□□ -0.7
CPSF7-212ENST00000489728 TARM1B6A8C7 271 aa10.69□□□□□ -0.7
CPSF7-212ENST00000489728 C9orf172C9J069 976 aa10.69□□□□□ -0.7
CPSF7-212ENST00000489728 STMND1H3BQB6 276 aa10.69□□□□□ -0.7
CPSF7-212ENST00000489728 RRP8O43159 456 aaKnown RBP10.69□□□□□ -0.7
CPSF7-212ENST00000489728 RIPK2O43353 540 aa10.69□□□□□ -0.7
CPSF7-212ENST00000489728 PRAMEF10O60809 474 aa10.69□□□□□ -0.7
CPSF7-212ENST00000489728 INHBAP08476 426 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms