RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 C10orf90Q96M02 699 aa2.75□□□□□ -1.97
CBWD1-216ENST00000489272 PPM1MQ96MI6 270 aa2.75□□□□□ -1.97
CBWD1-216ENST00000489272 OR2B2Q9GZK3 357 aa2.75□□□□□ -1.97
CBWD1-216ENST00000489272 MIS12Q9H081 205 aa2.75□□□□□ -1.97
CBWD1-216ENST00000489272 C9orf78Q9NZ63 289 aaPredicted RBP2.75□□□□□ -1.97
CBWD1-216ENST00000489272 LARSQ9P2J5 1176 aaKnown RBP2.75□□□□□ -1.97
CBWD1-216ENST00000489272 HACL1Q9UJ83 578 aa2.75□□□□□ -1.97
CBWD1-216ENST00000489272 CSNK1G3Q9Y6M4 447 aa2.75□□□□□ -1.97
CBWD1-216ENST00000489272 LNP1A1A4G5 178 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 HEPACAM2A8MVW5 462 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 MED24O75448 989 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 EIF3JO75822 258 aaKnown RBP2.74□□□□□ -1.97
CBWD1-216ENST00000489272 SLC2A2P11168 524 aaPredicted RBP2.74□□□□□ -1.97
CBWD1-216ENST00000489272 CDH3P22223 829 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 PIK3R1P27986 724 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 SUOXP51687 545 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 SIRPAP78324 504 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 TMF1P82094 1093 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 ODF4Q2M2E3 257 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 PHLDA2Q53GA4 152 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 ELFN2Q5R3F8 820 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 LCN1P1Q5VSP4 162 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 SNX30Q5VWJ9 437 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 HAUS6Q7Z4H7 955 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 CEP57L1Q8IYX8 460 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 AFAP1Q8N556 730 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 AQP11Q8NBQ7 271 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 NPEPL1Q8NDH3 523 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 GATAD1Q8WUU5 269 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 UCMAQ8WVF2 138 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 NECTIN4Q96NY8 510 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 AGAP4Q96P64 663 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 NEK1Q96PY6 1258 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 ITPAQ9BY32 194 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 FAM49AQ9H0Q0 323 aaPredicted RBP2.74□□□□□ -1.97
CBWD1-216ENST00000489272 PPIL3Q9H2H8 161 aaKnown RBP2.74□□□□□ -1.97
CBWD1-216ENST00000489272 UNC45AQ9H3U1 944 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 KCNK15Q9H427 330 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 B3GAT1Q9P2W7 334 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 TNNQ9UQP3 1299 aa2.74□□□□□ -1.97
CBWD1-216ENST00000489272 ZNF644Q9H582 1327 aaPredicted RBP2.73□□□□□ -1.97
CBWD1-216ENST00000489272 TSPAN1O60635 241 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 PRAMEF11O60813 436 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 CREG1O75629 220 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 IGHEP01854 428 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 DUX4L4P0CJ87 422 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 HSPA8P11142 646 aaKnown RBP2.73□□□□□ -1.97
CBWD1-216ENST00000489272 HLA-FP30511 346 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 MAN1A1P33908 653 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 MNDAP41218 407 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 SETQ01105 290 aaPredicted RBP2.73□□□□□ -1.97
CBWD1-216ENST00000489272 CXCL9Q07325 125 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 C15orf32Q32M92 178 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 XKR3Q5GH77 459 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 SEL1L3Q68CR1 1132 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 FIGLAQ6QHK4 219 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 ADGRF2Q8IZF7 708 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 OR11H4Q8NGC9 324 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 OR1L3Q8NH93 324 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 USP6NLQ92738 828 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 LRRC59Q96AG4 307 aaKnown RBP2.73□□□□□ -1.97
CBWD1-216ENST00000489272 RAD9AQ99638 391 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 NKX3-1Q99801 234 aaPredicted RBP2.73□□□□□ -1.97
CBWD1-216ENST00000489272 FTOQ9C0B1 505 aaKnown RBP eCLIP2.73□□□□□ -1.97
CBWD1-216ENST00000489272 SHARPINQ9H0F6 387 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 THAP2Q9H0W7 228 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 CHST11Q9NPF2 352 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 SERINC1Q9NRX5 453 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 KRT84Q9NSB2 600 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 FAM207AQ9NSI2 230 aaPredicted RBP2.73□□□□□ -1.97
CBWD1-216ENST00000489272 AASSQ9UDR5 926 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 ZNF148Q9UQR1 794 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 NME7Q9Y5B8 376 aa2.73□□□□□ -1.97
CBWD1-216ENST00000489272 C2orf81A6NN90 581 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 B4E171 279 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 PI4K2BG5E9Z4 385 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 THEGLP0DJG4 465 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 TM4SF1P30408 202 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 GABRA5P31644 462 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 TSPAN7P41732 249 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 LBX1P52954 281 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 MFAP4P55083 255 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 EFTUD2Q15029 972 aaKnown RBP eCLIP2.72□□□□□ -1.97
CBWD1-216ENST00000489272 HERC3Q15034 1050 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 FRRS1Q6ZNA5 592 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 MMS22LQ6ZRQ5 1243 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 G2E3Q7L622 706 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 ADGRA1Q86SQ6 560 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 LDB1Q86U70 411 aaPredicted RBP2.72□□□□□ -1.97
CBWD1-216ENST00000489272 CATSPERDQ86XM0 798 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 METTL4Q8N3J2 472 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.72□□□□□ -1.97
CBWD1-216ENST00000489272 MORC4Q8TE76 937 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 TOMM40LQ969M1 308 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 SPATC1LQ9H0A9 340 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 GKN1Q9NS71 199 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 OLA1Q9NTK5 396 aaKnown RBP2.72□□□□□ -1.97
CBWD1-216ENST00000489272 C19orf25Q9UFG5 118 aaPredicted RBP2.72□□□□□ -1.97
CBWD1-216ENST00000489272 STUB1Q9UNE7 303 aa2.72□□□□□ -1.97
CBWD1-216ENST00000489272 ANKUB1A6NFN9 424 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms