RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ATP5DP30049 168 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 RPA3P35244 121 aaPredicted RBP8.81□□□□□ -1
HDAC6-232ENST00000489053 BDKRB1P46663 353 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 KYNUQ16719 465 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 KCTD19Q17RG1 926 aaPredicted RBP8.81□□□□□ -1
HDAC6-232ENST00000489053 TYSND1Q2T9J0 566 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 BBS9Q3SYG4 887 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 CRTC2Q53ET0 693 aaPredicted RBP8.81□□□□□ -1
HDAC6-232ENST00000489053 ZC3H12BQ5HYM0 836 aaKnown RBP8.81□□□□□ -1
HDAC6-232ENST00000489053 ATP1A1-AS1Q5TC04 95 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 IZUMO3Q5VZ72 239 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 UGT3A1Q6NUS8 523 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 FAM199XQ6PEV8 388 aaPredicted RBP8.81□□□□□ -1
HDAC6-232ENST00000489053 PCSK4Q6UW60 755 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 CDHR3Q6ZTQ4 885 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 SYVN1Q86TM6 617 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 CAND1Q86VP6 1230 aaKnown RBP8.81□□□□□ -1
HDAC6-232ENST00000489053 KCNMB4Q86W47 210 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 CILP2Q8IUL8 1156 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 VRK3Q8IV63 474 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 SYTL1Q8IYJ3 562 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 TTC29Q8NA56 475 aaPredicted RBP8.81□□□□□ -1
HDAC6-232ENST00000489053 OR2L8Q8NGY9 312 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 OR1L3Q8NH93 324 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 LKAAEAR1Q8TD35 194 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 OR2A14Q96R47 310 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 CHST8Q9H2A9 424 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 FBXO6Q9NRD1 293 aaPredicted RBP8.81□□□□□ -1
HDAC6-232ENST00000489053 SPHK1Q9NYA1 384 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 UTP6Q9NYH9 597 aaKnown RBP8.81□□□□□ -1
HDAC6-232ENST00000489053 TRMT6Q9UJA5 497 aaKnown RBP8.81□□□□□ -1
HDAC6-232ENST00000489053 TUBD1Q9UJT1 453 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 PLCL2Q9UPR0 1127 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 FARSAQ9Y285 508 aaKnown RBP8.81□□□□□ -1
HDAC6-232ENST00000489053 COMMD10Q9Y6G5 202 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 ZNF106Q9H2Y7 1883 aaKnown RBP8.81□□□□□ -1
HDAC6-232ENST00000489053 J3QKU1 62 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 SMAPO00193 183 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 DNALI1O14645 258 aaPredicted RBP8.8□□□□□ -1
HDAC6-232ENST00000489053 ZNF749O43361 778 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 CCNDBP1O95273 360 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 FKBP9O95302 570 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 C1orf105O95561 183 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 MSL3P1P0C860 447 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 PIM1P11309 404 aaPredicted RBP8.8□□□□□ -1
HDAC6-232ENST00000489053 ENO3P13929 434 aaPredicted RBP8.8□□□□□ -1
HDAC6-232ENST00000489053 MAGP20916 626 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 ALAS2P22557 587 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 OAS2P29728 719 aaKnown RBP8.8□□□□□ -1
HDAC6-232ENST00000489053 CMPK1P30085 196 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 HSD17B2P37059 387 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 RGS4P49798 205 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 ADARP55265 1226 aaKnown RBP8.8□□□□□ -1
HDAC6-232ENST00000489053 ARL4CP56559 192 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 DCDP81605 110 aaKnown RBP8.8□□□□□ -1
HDAC6-232ENST00000489053 GPS2Q13227 327 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 CTBP1Q13363 440 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 PTCHD3Q3KNS1 767 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 LINC00303Q3SY05 128 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 LACTB2Q53H82 288 aaPredicted RBP8.8□□□□□ -1
HDAC6-232ENST00000489053 CTSL3PQ5NE16 218 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 THEMIS2Q5TEJ8 643 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 C1orf189Q5VU69 101 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 MLIPQ5VWP3 458 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 LRRC8EQ6NSJ5 796 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 TLDC1Q6P9B6 456 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 ATG14Q6ZNE5 492 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 RAB43Q86YS6 212 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 ZNF655Q8N720 491 aaPredicted RBP8.8□□□□□ -1
HDAC6-232ENST00000489053 ENDOVQ8N8Q3 282 aaKnown RBP8.8□□□□□ -1
HDAC6-232ENST00000489053 NAT8LQ8N9F0 302 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 EXD3Q8N9H8 876 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 THAP4Q8WY91 577 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 CFAP36Q96G28 342 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 LRFN5Q96NI6 719 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 IL17FQ96PD4 163 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 NRTNQ99748 197 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 SELENOSQ9BQE4 189 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 SEMA4CQ9C0C4 833 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 ZNF71Q9NQZ8 489 aaPredicted RBP8.8□□□□□ -1
HDAC6-232ENST00000489053 ACSS2Q9NR19 701 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 IARS2Q9NSE4 1012 aaKnown RBP8.8□□□□□ -1
HDAC6-232ENST00000489053 ABCF3Q9NUQ8 709 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 IL1RAPL1Q9NZN1 696 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 SPATA7Q9P0W8 599 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 IFT80Q9P2H3 777 aaPredicted RBP8.8□□□□□ -1
HDAC6-232ENST00000489053 RUVBL2Q9Y230 463 aaKnown RBP8.8□□□□□ -1
HDAC6-232ENST00000489053 PCDHGA6Q9Y5G7 932 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 SDK2Q58EX2 2172 aa8.8□□□□□ -1
HDAC6-232ENST00000489053 CCDC188H7C350 402 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 PEX12O00623 359 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 ZBTB14O43829 449 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 C1QL1O75973 258 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 RECKO95980 971 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 EIF2S1P05198 315 aaKnown RBP8.79□□□□□ -1
HDAC6-232ENST00000489053 RAB40ALP0C0E4 278 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 F8A1P23610 371 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 ARNTP27540 789 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 FOLR3P41439 243 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 SLC1A2P43004 574 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms