RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 TSPYL4Q9UJ04 414 aa4.05□□□□□ -1.76
ITGB1-214ENST00000488427 ZNF148Q9UQR1 794 aa4.05□□□□□ -1.76
ITGB1-214ENST00000488427 B3GALT5Q9Y2C3 310 aa4.05□□□□□ -1.76
ITGB1-214ENST00000488427 NAV2Q8IVL1 2488 aa4.05□□□□□ -1.76
ITGB1-214ENST00000488427 MYH14Q7Z406 1995 aaKnown RBP4.04□□□□□ -1.76
ITGB1-214ENST00000488427 LNP1A1A4G5 178 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 PMS2P5A8MQ11 134 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 PRR32B1ATL7 298 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 SMIM1B2RUZ4 78 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 PLK4O00444 970 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 SSX4O60224 188 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 DOK2O60496 412 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 PLA2G4BP0C869 781 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 MMP9P14780 707 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 PRLRP16471 622 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 GCH1P30793 250 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 HOXD13P35453 343 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 PSMC4P43686 418 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 MMP15P51511 669 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 HUNKP57058 714 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 MBTD1Q05BQ5 628 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 TECRLQ5HYJ1 363 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 MEX3BQ6ZN04 569 aaKnown RBP4.04□□□□□ -1.76
ITGB1-214ENST00000488427 ATG9AQ7Z3C6 839 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 HAUS6Q7Z4H7 955 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 CEP97Q8IW35 865 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 L3MBTL4Q8NA19 623 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 POC5Q8NA72 575 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 KLHDC9Q8NEP7 349 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 SEMA4DQ92854 862 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 NEK1Q96PY6 1258 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 GFI1Q99684 422 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 PITPNM3Q9BZ71 974 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 ADPRHL2Q9NX46 363 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 COQ3Q9NZJ6 369 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 ZNF624Q9P2J8 865 aaPredicted RBP4.04□□□□□ -1.76
ITGB1-214ENST00000488427 ACAD8Q9UKU7 415 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 NME7Q9Y5B8 376 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 ANKRD31Q8N7Z5 1873 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 SLX4Q8IY92 1834 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 LAMB2P55268 1798 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 COL5A3P25940 1745 aaPredicted RBP4.04□□□□□ -1.76
ITGB1-214ENST00000488427 NRXN2Q9P2S2 1712 aa4.04□□□□□ -1.76
ITGB1-214ENST00000488427 ZNF541Q9H0D2 1346 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 CFAP54Q96N23 3096 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 CSPG5O95196 566 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 TPOP07202 933 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 IGHV4-38-2P0DP08 117 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 CKMT2P17540 419 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 NMBRP28336 390 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 MAPK4P31152 587 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 TIMP3P35625 211 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 STAT2P52630 851 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 PPP2R2BQ00005 443 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 CXCL9Q07325 125 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 SPOCK1Q08629 439 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 SIM2Q14190 667 aaPredicted RBP4.03□□□□□ -1.76
ITGB1-214ENST00000488427 RALBP1Q15311 655 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 FAM98BQ52LJ0 330 aaKnown RBP4.03□□□□□ -1.76
ITGB1-214ENST00000488427 ALS2CLQ60I27 953 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 TMEM198Q66K66 360 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 MARK2Q7KZI7 788 aaKnown RBP4.03□□□□□ -1.76
ITGB1-214ENST00000488427 RBM15BQ8NDT2 890 aaKnown RBP4.03□□□□□ -1.76
ITGB1-214ENST00000488427 TBC1D16Q8TBP0 767 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 ALG14Q96F25 216 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 NSL1Q96IY1 281 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 RSRC1Q96IZ7 334 aaKnown RBP4.03□□□□□ -1.76
ITGB1-214ENST00000488427 GUCD1Q96NT3 240 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 F2RL3Q96RI0 385 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 SLC22A12Q96S37 553 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 BARD1Q99728 777 aaKnown RBP4.03□□□□□ -1.76
ITGB1-214ENST00000488427 GHITMQ9H3K2 345 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 KCNK15Q9H427 330 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 MRPL15Q9P015 296 aaKnown RBP4.03□□□□□ -1.76
ITGB1-214ENST00000488427 ERRFI1Q9UJM3 462 aaPredicted RBP4.03□□□□□ -1.76
ITGB1-214ENST00000488427 SLC7A7Q9UM01 511 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 GPR34Q9UPC5 381 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 C2CD2Q9Y426 696 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 RGPD2P0DJD1 1756 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 ZNF318Q5VUA4 2279 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 FAM208BQ5VWN6 2430 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 VPS8Q8N3P4 1428 aa4.03□□□□□ -1.76
ITGB1-214ENST00000488427 NUP155O75694 1391 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 KDM3BQ7LBC6 1761 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 FLNBO75369 2602 aaKnown RBP4.02□□□□□ -1.77
ITGB1-214ENST00000488427 A0A1W2PQ09 198 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 AGAP14A8MT82 685 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 MSH3P20585 1137 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 SLC6A6P31641 620 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 GLIPR1P48060 266 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 NRIP1P48552 1158 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 LMOD3Q0VAK6 560 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 MELKQ14680 651 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 MEA1Q16626 185 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 LRIT3Q3SXY7 679 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 ZNF876PQ49A33 203 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 WDR38Q5JTN6 314 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 FAM205BPQ63HN1 556 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 PLD3Q8IV08 490 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 WDSUB1Q8N9V3 476 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms