RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 MRPS18BQ9Y676 258 aaKnown RBP21.62■■□□□ 1.05
CDHR3-212ENST00000487084 KATNA1O75449 491 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 CYP2A7P20853 494 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 CARSP49589 748 aaKnown RBP21.61■■□□□ 1.05
CDHR3-212ENST00000487084 ZIC1Q15915 447 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 SPNS2Q8IVW8 549 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 C2CD4AQ8NCU7 369 aaPredicted RBP21.61■■□□□ 1.05
CDHR3-212ENST00000487084 GIMAP7Q8NHV1 300 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 STARD8Q92502 1023 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 CERS2Q96G23 380 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 TCTN2Q96GX1 697 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 NDNQ99608 321 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 GPR21Q99679 349 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 ARHGAP9Q9BRR9 750 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 SLC7A5P2Q9GIP4 190 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 DPH5Q9H2P9 285 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 SYTL2Q9HCH5 934 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 FAM60AQ9NP50 221 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 LHX9Q9NQ69 397 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 LATS2Q9NRM7 1088 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.61■■□□□ 1.05
CDHR3-212ENST00000487084 SLC17A6Q9P2U8 582 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 SERTAD3Q9UJW9 196 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 KLHL20Q9Y2M5 609 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 COMMD10Q9Y6G5 202 aa21.61■■□□□ 1.05
CDHR3-212ENST00000487084 FAM187AA6NFU0 413 aa21.6■■□□□ 1.05
CDHR3-212ENST00000487084 NKX2-8O15522 239 aa21.6■■□□□ 1.05
CDHR3-212ENST00000487084 RAD51CO43502 376 aa21.6■■□□□ 1.05
CDHR3-212ENST00000487084 VPS26AO75436 327 aa21.6■■□□□ 1.05
CDHR3-212ENST00000487084 PRB1P04280 392 aa21.6■■□□□ 1.05
CDHR3-212ENST00000487084 F8A1P23610 371 aa21.6■■□□□ 1.05
CDHR3-212ENST00000487084 ITGA1P56199 1179 aa21.6■■□□□ 1.05
CDHR3-212ENST00000487084 PDIA2Q13087 525 aaKnown RBP21.6■■□□□ 1.05
CDHR3-212ENST00000487084 CT55Q8WUE5 264 aa21.6■■□□□ 1.05
CDHR3-212ENST00000487084 SLC22A18Q96BI1 424 aa21.6■■□□□ 1.05
CDHR3-212ENST00000487084 LRRC39Q96DD0 335 aa21.6■■□□□ 1.05
CDHR3-212ENST00000487084 CLIP3Q96DZ5 547 aa21.6■■□□□ 1.05
CDHR3-212ENST00000487084 C16orf45Q96MC5 204 aaPredicted RBP21.6■■□□□ 1.05
CDHR3-212ENST00000487084 WDR83Q9BRX9 315 aaKnown RBP21.6■■□□□ 1.05
CDHR3-212ENST00000487084 AARSD1Q9BTE6 412 aaKnown RBP21.6■■□□□ 1.05
CDHR3-212ENST00000487084 IRAK4Q9NWZ3 460 aa21.6■■□□□ 1.05
CDHR3-212ENST00000487084 MED16Q9Y2X0 877 aa21.6■■□□□ 1.05
CDHR3-212ENST00000487084 ARHGEF33A8MVX0 844 aa21.59■■□□□ 1.05
CDHR3-212ENST00000487084 E7EQ34 232 aa21.59■■□□□ 1.05
CDHR3-212ENST00000487084 NDC80O14777 642 aa21.59■■□□□ 1.05
CDHR3-212ENST00000487084 MATN4O95460 622 aa21.59■■□□□ 1.05
CDHR3-212ENST00000487084 TCN2P20062 427 aa21.59■■□□□ 1.05
CDHR3-212ENST00000487084 MAGP20916 626 aa21.59■■□□□ 1.05
CDHR3-212ENST00000487084 LY6DQ14210 128 aa21.59■■□□□ 1.05
CDHR3-212ENST00000487084 SF1Q15637 639 aaKnown RBP21.59■■□□□ 1.05
CDHR3-212ENST00000487084 C16orf46Q6P387 395 aa21.59■■□□□ 1.05
CDHR3-212ENST00000487084 FAM199XQ6PEV8 388 aaPredicted RBP21.59■■□□□ 1.05
CDHR3-212ENST00000487084 MAATS1Q7Z4T9 603 aa21.59■■□□□ 1.05
CDHR3-212ENST00000487084 BBOF1Q8ND07 529 aa21.59■■□□□ 1.05
CDHR3-212ENST00000487084 CD200R1Q8TD46 325 aa21.59■■□□□ 1.05
CDHR3-212ENST00000487084 MR1Q95460 341 aa21.59■■□□□ 1.05
CDHR3-212ENST00000487084 FAM114A2Q9NRY5 505 aa21.59■■□□□ 1.05
CDHR3-212ENST00000487084 TRMT6Q9UJA5 497 aaKnown RBP21.59■■□□□ 1.05
CDHR3-212ENST00000487084 TEX264Q9Y6I9 313 aa21.59■■□□□ 1.05
CDHR3-212ENST00000487084 CATP04040 527 aaKnown RBP21.58■■□□□ 1.05
CDHR3-212ENST00000487084 ITGB2P05107 769 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 MSL3P1P0C860 447 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 CALCOCO2Q13137 446 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 GPS2Q13227 327 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 DNASE1L3Q13609 305 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.58■■□□□ 1.05
CDHR3-212ENST00000487084 CNTN4Q8IWV2 1026 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 CPNE9Q8IYJ1 553 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 GPR135Q8IZ08 494 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 LSM14AQ8ND56 463 aaKnown RBP21.58■■□□□ 1.05
CDHR3-212ENST00000487084 FBXO36Q8NEA4 188 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 INPP5DQ92835 1189 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 TWSG1Q9GZX9 223 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 ACTR5Q9H9F9 607 aaPredicted RBP21.58■■□□□ 1.05
CDHR3-212ENST00000487084 AKIRIN1Q9H9L7 192 aaPredicted RBP21.58■■□□□ 1.05
CDHR3-212ENST00000487084 PLAC1Q9HBJ0 212 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 SPATA7Q9P0W8 599 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 KLHL42Q9P2K6 505 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 KCND3Q9UK17 655 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 DHRS7Q9Y394 339 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 PCDHB3Q9Y5E6 796 aa21.58■■□□□ 1.05
CDHR3-212ENST00000487084 TP73O15350 636 aa21.57■■□□□ 1.04
CDHR3-212ENST00000487084 PSIP1O75475 530 aaKnown RBP21.57■■□□□ 1.04
CDHR3-212ENST00000487084 KLK3P07288 261 aaPredicted RBP21.57■■□□□ 1.04
CDHR3-212ENST00000487084 MCM3P25205 808 aa21.57■■□□□ 1.04
CDHR3-212ENST00000487084 PSMB5P28074 263 aa21.57■■□□□ 1.04
CDHR3-212ENST00000487084 MC1RQ01726 317 aa21.57■■□□□ 1.04
CDHR3-212ENST00000487084 CDC20Q12834 499 aa21.57■■□□□ 1.04
CDHR3-212ENST00000487084 TSTA3Q13630 321 aaPredicted RBP21.57■■□□□ 1.04
CDHR3-212ENST00000487084 FASTKD3Q14CZ7 662 aaKnown RBP21.57■■□□□ 1.04
CDHR3-212ENST00000487084 TBR1Q16650 682 aa21.57■■□□□ 1.04
CDHR3-212ENST00000487084 ATP1A1-AS1Q5TC04 95 aa21.57■■□□□ 1.04
CDHR3-212ENST00000487084 UGT3A1Q6NUS8 523 aa21.57■■□□□ 1.04
CDHR3-212ENST00000487084 TRMT10BQ6PF06 316 aaKnown RBP21.57■■□□□ 1.04
CDHR3-212ENST00000487084 KIAA0408Q6ZU52 694 aa21.57■■□□□ 1.04
CDHR3-212ENST00000487084 NEK10Q6ZWH5 1172 aa21.57■■□□□ 1.04
CDHR3-212ENST00000487084 SLC38A9Q8NBW4 561 aa21.57■■□□□ 1.04
CDHR3-212ENST00000487084 OR9A1PQ8NGU1 263 aa21.57■■□□□ 1.04
CDHR3-212ENST00000487084 DENND1AQ8TEH3 1009 aa21.57■■□□□ 1.04
CDHR3-212ENST00000487084 WBP1Q96G27 269 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms