RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 GFYI3L273 518 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 MYO1CO00159 1063 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 RIPK2O43353 540 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 INHBAP08476 426 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 ABHD2P08910 425 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 FGF3P11487 239 aaPredicted RBP11.45□□□□□ -0.58
HPS4-214ENST00000485842 ST6GAL1P15907 406 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 PSMB5P28074 263 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 VSNL1P62760 191 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 SH3BP2P78314 561 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 FOXM1Q08050 763 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 FASTKQ14296 549 aaKnown RBP11.45□□□□□ -0.58
HPS4-214ENST00000485842 KCNAB1Q14722 419 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 KIR2DS3Q14952 304 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 PHKG1Q16816 387 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 ERCC6LQ2NKX8 1250 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 MROH9Q5TGP6 573 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 ANKS6Q68DC2 871 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 MBOAT1Q6ZNC8 495 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 RAPH1Q70E73 1250 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 FAM20CQ8IXL6 584 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 SYTL1Q8IYJ3 562 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 SPATA6LQ8N4H0 392 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 MCOLN3Q8TDD5 553 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 ANKRD49Q8WVL7 239 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 KLHL6Q8WZ60 621 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 DLG3Q92796 817 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 USP7Q93009 1102 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 PMEPA1Q969W9 287 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 SLC46A1Q96NT5 459 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 CNTNAP3BQ96NU0 1288 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 OR2A14Q96R47 310 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 CNTNAP3Q9BZ76 1288 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 TXLNGYQ9BZA5 131 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 POPDC3Q9HBV1 291 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 ASCL3Q9NQ33 180 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 THSD1Q9NS62 852 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 ABCF3Q9NUQ8 709 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 SIDT1Q9NXL6 827 aaKnown RBP11.45□□□□□ -0.58
HPS4-214ENST00000485842 IKZF3Q9UKT9 509 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 PDE10AQ9Y233 779 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 SNRNP200O75643 2136 aaKnown RBP11.45□□□□□ -0.58
HPS4-214ENST00000485842 A0A0J9YY10 115 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 B4E171 279 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 CDC7O00311 574 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 SLC16A5O15375 505 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 PRAMEF10O60809 474 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 DXOO77932 396 aaKnown RBP11.44□□□□□ -0.58
HPS4-214ENST00000485842 ZBTB11O95625 1053 aaPredicted RBP11.44□□□□□ -0.58
HPS4-214ENST00000485842 SLC16A8O95907 504 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 EBLN1P0CF75 366 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 CCDC166P0CW27 439 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 NELFEP18615 380 aaKnown RBP11.44□□□□□ -0.58
HPS4-214ENST00000485842 OAS2P29728 719 aaKnown RBP11.44□□□□□ -0.58
HPS4-214ENST00000485842 SLC5A2P31639 672 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 GMPRP36959 345 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 TSPAN7P41732 249 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 MLLT3P42568 568 aaPredicted RBP11.44□□□□□ -0.58
HPS4-214ENST00000485842 MSH2P43246 934 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 PNLIPRP1P54315 467 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 RAB10P61026 200 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 HSD11B2P80365 405 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 ZKSCAN8Q15776 578 aaPredicted RBP11.44□□□□□ -0.58
HPS4-214ENST00000485842 SLC5A12Q1EHB4 618 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 TBC1D25Q3MII6 688 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 TMTC4Q5T4D3 741 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 SUSD1Q6UWL2 747 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 TAOK1Q7L7X3 1001 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 KMT5CQ86Y97 462 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 RASGRP3Q8IV61 690 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 BMPERQ8N8U9 685 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 C19orf47Q8N9M1 422 aaKnown RBP11.44□□□□□ -0.58
HPS4-214ENST00000485842 FBXO15Q8NCQ5 510 aaPredicted RBP11.44□□□□□ -0.58
HPS4-214ENST00000485842 PPFIBP2Q8ND30 876 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 FLVCR1-AS1Q8TAF5 88 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 ZNF480Q8WV37 535 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 UBLCP1Q8WVY7 318 aaPredicted RBP11.44□□□□□ -0.58
HPS4-214ENST00000485842 SLC44A1Q8WWI5 657 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 SMPDL3AQ92484 453 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 RNF31Q96EP0 1072 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 SLC41A2Q96JW4 573 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 OR6C1Q96RD1 312 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 SLC12A9Q9BXP2 914 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 PITPNM3Q9BZ71 974 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 PARVBQ9HBI1 364 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 APMAPQ9HDC9 416 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 C1GALT1Q9NS00 363 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 UTP6Q9NYH9 597 aaKnown RBP11.44□□□□□ -0.58
HPS4-214ENST00000485842 FOXJ2Q9P0K8 574 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.44□□□□□ -0.58
HPS4-214ENST00000485842 CTNNAL1Q9UBT7 734 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 KLHL20Q9Y2M5 609 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 CHD8Q9HCK8 2581 aa11.44□□□□□ -0.58
HPS4-214ENST00000485842 IGF2RP11717 2491 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 TMEM8BA6NDV4 472 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 ZNF839A8K0R7 811 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 HIST1H2AGP0C0S8 130 aaPredicted RBP11.43□□□□□ -0.58
HPS4-214ENST00000485842 ERGP11308 486 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 FOLR1P15328 257 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 HIST1H2ADP20671 130 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms