RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 IRAK4Q9NWZ3 460 aa9.08□□□□□ -0.96
NUP50-215ENST00000484186 EURLQ9NYK6 297 aa9.08□□□□□ -0.96
NUP50-215ENST00000484186 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.08□□□□□ -0.96
NUP50-215ENST00000484186 IFT80Q9P2H3 777 aaPredicted RBP9.08□□□□□ -0.96
NUP50-215ENST00000484186 DHCR7Q9UBM7 475 aaKnown RBP9.08□□□□□ -0.96
NUP50-215ENST00000484186 NDOR1Q9UHB4 597 aa9.08□□□□□ -0.96
NUP50-215ENST00000484186 GNPTGQ9UJJ9 305 aa9.08□□□□□ -0.96
NUP50-215ENST00000484186 SLC39A10Q9ULF5 831 aa9.08□□□□□ -0.96
NUP50-215ENST00000484186 G3BP2Q9UN86 482 aaKnown RBP9.08□□□□□ -0.96
NUP50-215ENST00000484186 SRPK3Q9UPE1 567 aa9.08□□□□□ -0.96
NUP50-215ENST00000484186 UBR5O95071 2799 aaPredicted RBP9.07□□□□□ -0.96
NUP50-215ENST00000484186 A6NL46 340 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 RASGRF2O14827 1237 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 CEP104O60308 925 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 DPM1O60762 260 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 VAPBO95292 243 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 TPSB2P20231 275 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 MAGP20916 626 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 ALAS2P22557 587 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 MGAT1P26572 445 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 OTX2P32243 289 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 FOLR3P41439 243 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 ARSFP54793 590 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 ATP1A4Q13733 1029 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 SF1Q15637 639 aaKnown RBP9.07□□□□□ -0.96
NUP50-215ENST00000484186 TPSAB1Q15661 275 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 NADK2Q4G0N4 442 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 MRPL14Q6P1L8 145 aaKnown RBP9.07□□□□□ -0.96
NUP50-215ENST00000484186 FIGLAQ6QHK4 219 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 OTOAQ7RTW8 1153 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 SDCCAG8Q86SQ7 713 aaPredicted RBP9.07□□□□□ -0.96
NUP50-215ENST00000484186 HPS6Q86YV9 775 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 MCATQ8IVS2 390 aaKnown RBP9.07□□□□□ -0.96
NUP50-215ENST00000484186 LRRC8AQ8IWT6 810 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 CPT1CQ8TCG5 803 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 DENND1AQ8TEH3 1009 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 DLG3Q92796 817 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 RAD51AP1Q96B01 352 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 PTERQ96BW5 349 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 MFSD3Q96ES6 412 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 FER1L6-AS2Q96M78 137 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 SMAD5Q99717 465 aaKnown RBP9.07□□□□□ -0.96
NUP50-215ENST00000484186 NDC1Q9BTX1 674 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 NUDT9Q9BW91 350 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 RAB11FIP5Q9BXF6 653 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 INTS7Q9NVH2 962 aaKnown RBP9.07□□□□□ -0.96
NUP50-215ENST00000484186 SYBUQ9NX95 663 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 ANKMY1Q9P2S6 941 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 CIDEBQ9UHD4 219 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 KLHL20Q9Y2M5 609 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 PTRH2Q9Y3E5 179 aaKnown RBP9.07□□□□□ -0.96
NUP50-215ENST00000484186 MRFAP1Q9Y605 127 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 MED13Q9UHV7 2174 aa9.07□□□□□ -0.96
NUP50-215ENST00000484186 TCRBV7S3A2A0A539 114 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 CLEC18AA5D8T8 446 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 CYSRT1A8MQ03 144 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 TARM1B6A8C7 271 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 PEX12O00623 359 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 PFDN6O15212 129 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 PRICKLE3O43900 615 aaPredicted RBP9.06□□□□□ -0.96
NUP50-215ENST00000484186 VPS4BO75351 444 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 FKBP9O95302 570 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 C1orf105O95561 183 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 IGHEP01854 428 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 ATXN8OSP0DMR3 200 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 ARNTP27540 789 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 FMO4P31512 558 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 CXCR5P32302 372 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 GCGRP47871 477 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 EIF3BP55884 814 aaKnown RBP9.06□□□□□ -0.96
NUP50-215ENST00000484186 SARNPP82979 210 aaKnown RBP9.06□□□□□ -0.96
NUP50-215ENST00000484186 SRSF1Q07955 248 aaKnown RBP eCLIP9.06□□□□□ -0.96
NUP50-215ENST00000484186 NKAIN1Q4KMZ8 207 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 ZC3H12BQ5HYM0 836 aaKnown RBP9.06□□□□□ -0.96
NUP50-215ENST00000484186 CTSL3PQ5NE16 218 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 FCRL6Q6DN72 434 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 MRNIPQ6NTE8 343 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 CES3Q6UWW8 571 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 CLEC18BQ6UXF7 455 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 MRGPREQ86SM8 312 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 TAX1BP1Q86VP1 789 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 RAB42Q8N4Z0 105 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 FAM26EQ8N5C1 309 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 OTUD6BQ8N6M0 293 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 EFCAB3Q8N7B9 438 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 PRELID2Q8N945 189 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 CLEC18CQ8NCF0 446 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 OR2Y1Q8NGV0 311 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 MAGEC3Q8TD91 643 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 SKA2Q8WVK7 121 aaPredicted RBP9.06□□□□□ -0.96
NUP50-215ENST00000484186 ZUFSPQ96AP4 578 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 FOPNLQ96NB1 174 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 BIRC8Q96P09 236 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 TCF12Q99081 682 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 GPR83Q9NYM4 423 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 C5AR2Q9P296 337 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 TTC7AQ9ULT0 858 aaPredicted RBP9.06□□□□□ -0.96
NUP50-215ENST00000484186 VPS4AQ9UN37 437 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 SOX13Q9UN79 622 aa9.06□□□□□ -0.96
NUP50-215ENST00000484186 MAP4K5Q9Y4K4 846 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms