RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 FCRL6Q6DN72 434 aa17.33■□□□□ 0.36
ATG4B-221ENST00000483778 MCATQ8IVS2 390 aaKnown RBP17.33■□□□□ 0.36
ATG4B-221ENST00000483778 RNF10Q8N5U6 811 aaKnown RBP17.33■□□□□ 0.36
ATG4B-221ENST00000483778 GALNT11Q8NCW6 608 aa17.33■□□□□ 0.36
ATG4B-221ENST00000483778 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.33■□□□□ 0.36
ATG4B-221ENST00000483778 SMAD5Q99717 465 aaKnown RBP17.33■□□□□ 0.36
ATG4B-221ENST00000483778 CARD6Q9BX69 1037 aa17.33■□□□□ 0.36
ATG4B-221ENST00000483778 ZBTB20Q9HC78 741 aaPredicted RBP17.33■□□□□ 0.36
ATG4B-221ENST00000483778 EURLQ9NYK6 297 aa17.33■□□□□ 0.36
ATG4B-221ENST00000483778 GPR83Q9NYM4 423 aa17.33■□□□□ 0.36
ATG4B-221ENST00000483778 VPS4AQ9UN37 437 aa17.33■□□□□ 0.36
ATG4B-221ENST00000483778 PLCL2Q9UPR0 1127 aa17.33■□□□□ 0.36
ATG4B-221ENST00000483778 RUVBL2Q9Y230 463 aaKnown RBP17.33■□□□□ 0.36
ATG4B-221ENST00000483778 AP1M2Q9Y6Q5 423 aa17.33■□□□□ 0.36
ATG4B-221ENST00000483778 CACNA1DQ01668 2161 aa17.32■□□□□ 0.36
ATG4B-221ENST00000483778 PRICKLE3O43900 615 aaPredicted RBP17.32■□□□□ 0.36
ATG4B-221ENST00000483778 SLCO2B1O94956 709 aa17.32■□□□□ 0.36
ATG4B-221ENST00000483778 MCM3P25205 808 aa17.32■□□□□ 0.36
ATG4B-221ENST00000483778 NMBRP28336 390 aa17.32■□□□□ 0.36
ATG4B-221ENST00000483778 PRAMEP78395 509 aa17.32■□□□□ 0.36
ATG4B-221ENST00000483778 MRPL49Q13405 166 aaKnown RBP17.32■□□□□ 0.36
ATG4B-221ENST00000483778 DNAJC21Q5F1R6 531 aaKnown RBP17.32■□□□□ 0.36
ATG4B-221ENST00000483778 SEL1L2Q5TEA6 688 aa17.32■□□□□ 0.36
ATG4B-221ENST00000483778 MRPL14Q6P1L8 145 aaKnown RBP17.32■□□□□ 0.36
ATG4B-221ENST00000483778 CES3Q6UWW8 571 aa17.32■□□□□ 0.36
ATG4B-221ENST00000483778 PPP1R32Q7Z5V6 425 aa17.32■□□□□ 0.36
ATG4B-221ENST00000483778 EFCAB3Q8N7B9 438 aa17.32■□□□□ 0.36
ATG4B-221ENST00000483778 SGSM3Q96HU1 749 aa17.32■□□□□ 0.36
ATG4B-221ENST00000483778 DHRS4Q9BTZ2 278 aa17.32■□□□□ 0.36
ATG4B-221ENST00000483778 IFT80Q9P2H3 777 aaPredicted RBP17.32■□□□□ 0.36
ATG4B-221ENST00000483778 NFS1Q9Y697 457 aa17.32■□□□□ 0.36
ATG4B-221ENST00000483778 TCP11X1B4DZS4 312 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 CD3EAPO15446 510 aaKnown RBP17.31■□□□□ 0.36
ATG4B-221ENST00000483778 NRP2O60462 931 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 ALOX12BO75342 701 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 GAS8O95995 478 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 CD9P21926 228 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 ALAS2P22557 587 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 KCNJ1P48048 391 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 RAB28P51157 221 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 YBX1P67809 324 aaKnown RBP17.31■□□□□ 0.36
ATG4B-221ENST00000483778 PLOD1Q02809 727 aaPredicted RBP17.31■□□□□ 0.36
ATG4B-221ENST00000483778 EIF2S3LQ2VIR3 472 aaKnown RBP17.31■□□□□ 0.36
ATG4B-221ENST00000483778 MEI1Q5TIA1 1274 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 FIGLAQ6QHK4 219 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 RAB43Q86YS6 212 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 OR2Y1Q8NGV0 311 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 ASZ1Q8WWH4 475 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 P2RY12Q9H244 342 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 TREX1Q9NSU2 369 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 CATSPERZQ9NTU4 200 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 P4HTMQ9NXG6 502 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 GPN3Q9UHW5 284 aaPredicted RBP17.31■□□□□ 0.36
ATG4B-221ENST00000483778 PCDHGB7Q9Y5F8 929 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 TEX15Q9BXT5 2789 aa17.31■□□□□ 0.36
ATG4B-221ENST00000483778 TCRBV7S3A2A0A539 114 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 DPM1O60762 260 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 MED26O95402 600 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 ARNTP27540 789 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 PSMB5P28074 263 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 CDC25BP30305 580 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 FOLR3P41439 243 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 RRADP55042 308 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 PCID2Q5JVF3 399 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 DCAF10Q5QP82 559 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 TLDC1Q6P9B6 456 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 OR2L8Q8NGY9 312 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 INPP5DQ92835 1189 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 PTERQ96BW5 349 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 MESP1Q9BRJ9 268 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 FRMD8P1Q9BZ68 369 aaPredicted RBP17.3■□□□□ 0.36
ATG4B-221ENST00000483778 ZNF552Q9H707 407 aaPredicted RBP17.3■□□□□ 0.36
ATG4B-221ENST00000483778 IRAK4Q9NWZ3 460 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 PAK5Q9P286 719 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 STOX2Q9P2F5 926 aaPredicted RBP17.3■□□□□ 0.36
ATG4B-221ENST00000483778 GALPQ9UBC7 116 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 PADI2Q9Y2J8 665 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 SVILO95425 2214 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 ZGRF1Q86YA3 2104 aa17.3■□□□□ 0.36
ATG4B-221ENST00000483778 GOLGA8KD6RF30 607 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 GOLGA8TH3BQL2 631 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 PRMT5O14744 637 aaPredicted RBP17.29■□□□□ 0.36
ATG4B-221ENST00000483778 CTSVO60911 334 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 APOA4P06727 396 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 BDKRB1P46663 353 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 RPS6KA1Q15418 735 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 CCNG2Q16589 344 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 SHISA6Q6ZSJ9 500 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 TTLL10Q6ZVT0 673 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 COX15Q7KZN9 410 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 NLRP9Q7RTR0 991 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 CCDC89Q8N998 374 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 PPHLN1Q8NEY8 458 aaKnown RBP17.29■□□□□ 0.36
ATG4B-221ENST00000483778 PROKR1Q8TCW9 393 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 DENND1AQ8TEH3 1009 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 TTC1Q99614 292 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 NDC1Q9BTX1 674 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 LRRC4CQ9HCJ2 640 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 SLAMF7Q9NQ25 335 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 TXLNGQ9NUQ3 528 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms