RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 RGS14O43566 566 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 NRP2O60462 931 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 IGLV3-19P01714 112 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 CD72P21854 359 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 ITPKAP23677 461 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 ZFP36L2P47974 494 aaKnown RBP13.64□□□□□ -0.23
CLK3-204ENST00000483723 PLA2G4EQ3MJ16 856 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 ATP6AP1LQ52LC2 224 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 CAPRIN2Q6IMN6 1127 aaKnown RBP13.64□□□□□ -0.23
CLK3-204ENST00000483723 C16orf89Q6UX73 402 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 HACD2Q6Y1H2 254 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 NET1Q7Z628 596 aaPredicted RBP13.64□□□□□ -0.23
CLK3-204ENST00000483723 PGAM4Q8N0Y7 254 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 OR9I1Q8NGQ6 314 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 OR2T34Q8NGX1 318 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 MAGEC3Q8TD91 643 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 CLPTM1LQ96KA5 538 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 UHRF1Q96T88 793 aaPredicted RBP13.64□□□□□ -0.23
CLK3-204ENST00000483723 TIMM29Q9BSF4 260 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 SGPP1Q9BX95 441 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 BTBD1Q9H0C5 482 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 FARSBQ9NSD9 589 aaKnown RBP13.64□□□□□ -0.23
CLK3-204ENST00000483723 GPRC5BQ9NZH0 403 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 ZIM2Q9NZV7 527 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 USP36Q9P275 1121 aaKnown RBP13.64□□□□□ -0.23
CLK3-204ENST00000483723 EBF1Q9UH73 591 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 SLC7A8Q9UHI5 535 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 ZNHIT2Q9UHR6 403 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 ACSL5Q9ULC5 683 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 ZNF490Q9ULM2 529 aaPredicted RBP13.64□□□□□ -0.23
CLK3-204ENST00000483723 PRPF19Q9UMS4 504 aaKnown RBP13.64□□□□□ -0.23
CLK3-204ENST00000483723 DUSP12Q9UNI6 340 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 TCRBV21S2A2A0A5A6 115 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 FFAR3O14843 346 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 GPR42O15529 346 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 JUPP14923 745 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 PRPH2P23942 346 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 ACSL1P33121 698 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 NUDT2P50583 147 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 CHIT1Q13231 466 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 ZRSR2Q15696 482 aaKnown RBP13.64□□□□□ -0.23
CLK3-204ENST00000483723 KIF19Q2TAC6 998 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 AP5B1Q2VPB7 878 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 RFTN2Q52LD8 501 aaPredicted RBP13.64□□□□□ -0.23
CLK3-204ENST00000483723 BLOC1S3Q6QNY0 202 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 KIAA1324Q6UXG2 1013 aaKnown RBP13.64□□□□□ -0.23
CLK3-204ENST00000483723 SYNPOQ8N3V7 929 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 WDR60Q8WVS4 1066 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 NPAS2Q99743 824 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 MRPL1Q9BYD6 325 aaKnown RBP13.64□□□□□ -0.23
CLK3-204ENST00000483723 SGK2Q9HBY8 427 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 CD93Q9NPY3 652 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 TM7SF3Q9NS93 570 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 ASIC5Q9NY37 505 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 BAIAP2L1Q9UHR4 511 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 SNX6Q9UNH7 406 aa13.64□□□□□ -0.23
CLK3-204ENST00000483723 BBIP1A8MTZ0 92 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 E7ENX8 843 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 SLC31A1O15431 190 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 ERGP11308 486 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 MAT2AP31153 395 aaKnown RBP13.63□□□□□ -0.23
CLK3-204ENST00000483723 GNPDA1P46926 289 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 MTTPP55157 894 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 KIAA1024LP59773 190 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 TAP2Q03519 686 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 TBL3Q12788 808 aaKnown RBP13.63□□□□□ -0.23
CLK3-204ENST00000483723 RPS6KA2Q15349 733 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 NR6A1Q15406 480 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 SNCBQ16143 134 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 CPSF6Q16630 551 aaKnown RBP eCLIP13.63□□□□□ -0.23
CLK3-204ENST00000483723 PYCR3Q53H96 274 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 COQ5Q5HYK3 327 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 PTCRAQ6ISU1 281 aaPredicted RBP13.63□□□□□ -0.23
CLK3-204ENST00000483723 C8orf82Q6P1X6 216 aaPredicted RBP13.63□□□□□ -0.23
CLK3-204ENST00000483723 ZNF852Q6ZMS4 543 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 FAM124AQ86V42 546 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 RGL4Q8IZJ4 473 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 FNDC5Q8NAU1 212 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 SPDYE1Q8NFV5 336 aaPredicted RBP13.63□□□□□ -0.23
CLK3-204ENST00000483723 SETD7Q8WTS6 366 aaKnown RBP13.63□□□□□ -0.23
CLK3-204ENST00000483723 TFGQ92734 400 aaPredicted RBP13.63□□□□□ -0.23
CLK3-204ENST00000483723 RAD51AP1Q96B01 352 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 WDR34Q96EX3 536 aa13.63□□□□□ -0.23
CLK3-204ENST00000483723 LRRC72A6NJI9 287 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 CACNB4O00305 520 aaPredicted RBP13.62□□□□□ -0.23
CLK3-204ENST00000483723 ANKRD28O15084 1053 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 LATO43561 262 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 PDYNP01213 254 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 NPPBP16860 134 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 CD22P20273 847 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 KELP23276 732 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 HNF4AP41235 474 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 DGKEP52429 567 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 IRF8Q02556 426 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 PRKCQQ04759 706 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 ART3Q13508 389 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 KIAA0040Q15053 153 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 PUS10Q3MIT2 529 aaKnown RBP13.62□□□□□ -0.23
CLK3-204ENST00000483723 REP15Q6BDI9 236 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 CAPN13Q6MZZ7 669 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms