RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 CSF2RAP15509 400 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 MARK3P27448 753 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 SNX16P57768 344 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 DMP1Q13316 513 aaPredicted RBP3.46□□□□□ -1.86
COPA-204ENST00000481522 UBE2V1Q13404 147 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 GALNT5Q7Z7M9 940 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 TAGAPQ8N103 731 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 SLC24A4Q8NFF2 622 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 CALML4Q96GE6 196 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 OXNAD1Q96HP4 312 aaPredicted RBP3.46□□□□□ -1.86
COPA-204ENST00000481522 CEP295NLQ96MC4 621 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 GFI1Q99684 422 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 HGH1Q9BTY7 390 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 CCDC68Q9H2F9 335 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 PAG1Q9NWQ8 432 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 MAP3K20Q9NYL2 800 aaKnown RBP3.46□□□□□ -1.86
COPA-204ENST00000481522 KLHL9Q9P2J3 617 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 DNAJB4Q9UDY4 337 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 SEC63Q9UGP8 760 aaKnown RBP3.46□□□□□ -1.86
COPA-204ENST00000481522 TSPYL4Q9UJ04 414 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 FBXO2Q9UK22 296 aaPredicted RBP3.46□□□□□ -1.86
COPA-204ENST00000481522 TMEM5Q9Y2B1 443 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 YIPF1Q9Y548 306 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 SBNO1A3KN83 1393 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 VWFP04275 2813 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 HIVEP3Q5T1R4 2406 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 KMT2CQ8NEZ4 4911 aaKnown RBP3.45□□□□□ -1.86
COPA-204ENST00000481522 CACNA1DQ01668 2161 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 IGLV5-45A0A087WSX0 123 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 A0A1W2PR77 199 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 hCG_1807616A0A1W2PRN6 198 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 CTAGE9A4FU28 777 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 J3QR06 171 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 DCXO43602 365 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 SYNGR3O43761 229 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 PDE9AO76083 593 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 GFPT2O94808 682 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 BMP10O95393 424 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 PRSS1P07477 247 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 CTAGE8P0CG41 777 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 MMP9P14780 707 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 GM2AP17900 193 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 ARCN1P48444 511 aaKnown RBP3.45□□□□□ -1.86
COPA-204ENST00000481522 CD81P60033 236 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 PPP2R2BQ00005 443 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 EPS8Q12929 822 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 GAGE2BQ13066 116 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 KRT33BQ14525 404 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 KRTAP24-1Q3LI83 254 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 GAGE2EQ4V326 116 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 ASPRV1Q53RT3 343 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 RAB6CQ53S08 254 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 WDR78Q5VTH9 848 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 GAGE2AQ6NT46 116 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 ZNF852Q6ZMS4 543 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 ZNF534Q76KX8 674 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 GALNT13Q8IUC8 556 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 CEP97Q8IW35 865 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 CTAGE4Q8IX94 777 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 GBGT1Q8N5D6 347 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 POC5Q8NA72 575 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 TRMT61BQ9BVS5 477 aaKnown RBP3.45□□□□□ -1.86
COPA-204ENST00000481522 RTN4RQ9BZR6 473 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 RAB6CQ9H0N0 254 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 UPF2Q9HAU5 1272 aaKnown RBP3.45□□□□□ -1.86
COPA-204ENST00000481522 FAM118AQ9NWS6 357 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 ARHGEF38Q9NXL2 777 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 GAGE2DQ9UEU5 116 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 MTUS2Q5JR59 1369 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 ITPR2Q14571 2701 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 GCC2Q8IWJ2 1684 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 CELSR2Q9HCU4 2923 aa3.45□□□□□ -1.86
COPA-204ENST00000481522 ARHGAP31Q2M1Z3 1444 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 CACNA1SQ13698 1873 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 DLEC1Q9Y238 1755 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 E9PCH4 1651 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 PRXQ9BXM0 1461 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 LNP1A1A4G5 178 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 J3QKU1 62 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 PLK4O00444 970 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 NDUFS4O43181 175 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 RSL1D1O76021 490 aaKnown RBP3.44□□□□□ -1.86
COPA-204ENST00000481522 IGHV4-39P01824 125 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 PORP16435 677 aaPredicted RBP3.44□□□□□ -1.86
COPA-204ENST00000481522 SAT1P21673 171 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 MCCP23508 829 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 ARSEP51690 589 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 PNLIPRP2P54317 469 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 VCPP55072 806 aaKnown RBP3.44□□□□□ -1.86
COPA-204ENST00000481522 RPL24P83731 157 aaKnown RBP3.44□□□□□ -1.86
COPA-204ENST00000481522 DLG2Q15700 870 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 CCNYL2Q5T2Q4 361 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 PACS1Q6VY07 963 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 SMPDL3BQ92485 455 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 JAKMIP2Q96AA8 810 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 FBXO17Q96EF6 278 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 NEUROD6Q96NK8 337 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 TEX12Q9BXU0 123 aa3.44□□□□□ -1.86
COPA-204ENST00000481522 SEMA6AQ9H2E6 1030 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms