RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 TNRC6AQ8NDV7 1962 aaKnown RBP6.32□□□□□ -1.4
LRCH3-216ENST00000481048 GOLGA6L19H0YKK7 550 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 MKRN2OSH3BPM6 223 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 KCNK1O00180 336 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 APOL1O14791 398 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 NKX2-8O15522 239 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 MTSS1O43312 755 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 NDST3O95803 873 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 EPOP01588 193 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 GYPCP04921 128 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 FGF5P12034 268 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 IDSP22304 550 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 HMGCLP35914 325 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 SLC1A1P43005 524 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 NR2C2P49116 596 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 GFRA1P56159 465 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 AP1B1Q10567 949 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 KLRB1Q12918 225 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 TRIM14Q14142 442 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 INSCQ1MX18 579 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 TEX44Q53QW1 395 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 TCTN3Q6NUS6 607 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 CAVIN1Q6NZI2 390 aaKnown RBP6.32□□□□□ -1.4
LRCH3-216ENST00000481048 KLHL35Q6PF15 583 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 PRSS42Q7Z5A4 293 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 PPP1R3BQ86XI6 285 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 KMT5CQ86Y97 462 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 TRIM48Q8IWZ4 208 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.32□□□□□ -1.4
LRCH3-216ENST00000481048 PLD5Q8N7P1 536 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 GPR26Q8NDV2 337 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 NUDT10Q8NFP7 164 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 OR8K1Q8NGG5 319 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 PHOSPHO1Q8TCT1 267 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-216ENST00000481048 ZFPM2Q8WW38 1151 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 STARD8Q92502 1023 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 RAPGEF5Q92565 580 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 EID2BQ96D98 161 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 NUDT11Q96G61 164 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 TTC25Q96NG3 672 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 SMIM14Q96QK8 99 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 TRIB3Q96RU7 358 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 VAT1Q99536 393 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 TBC1D10AQ9BXI6 508 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 GPR63Q9BZJ6 419 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 ULBP3Q9BZM4 244 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 TRIM4Q9C037 500 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 APMAPQ9HDC9 416 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 PRDM8Q9NQV8 689 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 ZNHIT6Q9NWK9 470 aaKnown RBP6.32□□□□□ -1.4
LRCH3-216ENST00000481048 SIDT1Q9NXL6 827 aaKnown RBP6.32□□□□□ -1.4
LRCH3-216ENST00000481048 DDX56Q9NY93 547 aaKnown RBP6.32□□□□□ -1.4
LRCH3-216ENST00000481048 HACD3Q9P035 362 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 ADAM29Q9UKF5 820 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 PADI1Q9ULC6 663 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 POLHQ9Y253 713 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 PRKAB1Q9Y478 270 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 PCDHGA6Q9Y5G7 932 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 PCYT1BQ9Y5K3 369 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-216ENST00000481048 CREBBPQ92793 2442 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 DOCK10Q96BY6 2186 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 SNRNP200O75643 2136 aaKnown RBP6.32□□□□□ -1.4
LRCH3-216ENST00000481048 USP9XQ93008 2570 aaPredicted RBP6.31□□□□□ -1.4
LRCH3-216ENST00000481048 UBR5O95071 2799 aaPredicted RBP6.31□□□□□ -1.4
LRCH3-216ENST00000481048 A0A0A6YYK5 440 aaPredicted RBP6.31□□□□□ -1.4
LRCH3-216ENST00000481048 LOC285095A0A1B0GVY8 99 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 LRRD1A4D1F6 860 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 C3orf70A6NLC5 250 aaPredicted RBP6.31□□□□□ -1.4
LRCH3-216ENST00000481048 PDZK1P1A8MUH7 402 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 C21orf140B9A014 251 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 PYCARD-AS1I3L0S3 204 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 SMAD7O15105 426 aaKnown RBP6.31□□□□□ -1.4
LRCH3-216ENST00000481048 SUSD5O60279 629 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 SPAG6O75602 509 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 NDUFA10O95299 355 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 PYGMP11217 842 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 BPIP17213 487 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 NELFEP18615 380 aaKnown RBP6.31□□□□□ -1.4
LRCH3-216ENST00000481048 OAS2P29728 719 aaKnown RBP6.31□□□□□ -1.4
LRCH3-216ENST00000481048 CASP14P31944 242 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 HALP42357 657 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 TNNT3P45378 269 aaPredicted RBP6.31□□□□□ -1.4
LRCH3-216ENST00000481048 TAS2R40P59535 323 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 ACY1Q03154 408 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 SRSF1Q07955 248 aaKnown RBP eCLIP6.31□□□□□ -1.4
LRCH3-216ENST00000481048 FOXM1Q08050 763 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 DMPKQ09013 629 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 TMEM115Q12893 351 aaPredicted RBP6.31□□□□□ -1.4
LRCH3-216ENST00000481048 ZBTB17Q13105 803 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 ITGA9Q13797 1035 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 TFDP2Q14188 446 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 GALNT3Q14435 633 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 MESDQ14696 234 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 ASTE1Q2TB18 679 aaPredicted RBP6.31□□□□□ -1.4
LRCH3-216ENST00000481048 DEFB109BQ30KR1 87 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 LACTB2Q53H82 288 aaPredicted RBP6.31□□□□□ -1.4
LRCH3-216ENST00000481048 ODF2Q5BJF6 829 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 COLEC12Q5KU26 742 aa6.31□□□□□ -1.4
LRCH3-216ENST00000481048 CACHD1Q5VU97 1274 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms