RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 ACTC1P68032 377 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 ACTA1P68133 377 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 ST3GAL3Q11203 375 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 SCAPQ12770 1279 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 KCNAB2Q13303 367 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 NAE1Q13564 534 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 TAF13Q15543 124 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 LY6KQ17RY6 165 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 FAM110CQ1W6H9 321 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 CRB2Q5IJ48 1285 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 TREML1Q86YW5 311 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 PHYKPLQ8IUZ5 450 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 ZDHHC14Q8IZN3 488 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 LGALS12Q96DT0 336 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 HERC2P3Q9BVR0 1158 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 AKTIPQ9H8T0 292 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 TMEM184CQ9NVA4 438 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 KLHL42Q9P2K6 505 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 LIPT1Q9Y234 373 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 TMA7Q9Y2S6 64 aaKnown RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 FBP2O00757 339 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 SDHDO14521 159 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 EIF1AYO14602 144 aaKnown RBP6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 PPEF2O14830 753 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 PRAF2O60831 178 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 AOC2O75106 756 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 PCDH8O95206 1070 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 NELFEP18615 380 aaKnown RBP6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 TNFSF9P41273 254 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 EIF1AXP47813 144 aaKnown RBP6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 ZNF157P51786 506 aaPredicted RBP6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 RASGEF1BQ0VAM2 473 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 EFR3AQ14156 821 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 PTGR1Q14914 329 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 OLFML2AQ68BL7 652 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 TMEM199Q8N511 208 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 TRPM4Q8TD43 1214 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 TTPALQ9BTX7 342 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 FGFBP2Q9BYJ0 223 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 XKR8Q9H6D3 395 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 EVA1AQ9H8M9 152 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 TCF7L1Q9HCS4 588 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 ASAH2Q9NR71 780 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 ZCCHC3Q9NUD5 404 aaKnown RBP6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 RDH8Q9NYR8 311 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 TAS2R8Q9NYW2 309 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 NUFIP1Q9UHK0 495 aaKnown RBP6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 SCP2D1Q9UJQ7 156 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 TIMM22Q9Y584 194 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 PIK3C2BO00750 1634 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 LOC100130705A0A1B0GUX0 176 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 E9PAM4 449 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 I3L521 148 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 XKRYO14609 159 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 GRID2O43424 1007 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 CREG1O75629 220 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 ZNF30P17039 623 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 MYF6P23409 242 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 AZGP1P25311 298 aaKnown RBP6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 STOMP27105 288 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 LEPRP48357 1165 aaKnown RBP6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 CDK6Q00534 326 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 MPP2Q14168 576 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 LDLRAP1Q5SW96 308 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 XKR5Q6UX68 686 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 SCML4Q8N228 414 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 SDR16C5Q8N3Y7 309 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 CERS5Q8N5B7 392 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 FAM46DQ8NEK8 389 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 TRAPPC12Q8WVT3 735 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 POF1BQ8WVV4 589 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 PYURFQ96I23 114 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 UCK2Q9BZX2 261 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 GPR88Q9GZN0 384 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 TPT1P8Q9HAU6 139 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 EMC3Q9P0I2 261 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 HSPB11Q9Y547 144 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 A0A1W2PRB8 838 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 DAPL1A0PJW8 107 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 SLC16A5O15375 505 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 SLC25A12O75746 678 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 ADAP00813 363 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 IL3P08700 152 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 FGF3P11487 239 aaPredicted RBP6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 KDELR2P33947 212 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 MAP2K5Q13163 448 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 SLC10A6Q3KNW5 377 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 TAF8Q7Z7C8 310 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 SYVN1Q86TM6 617 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 RALGPS2Q86X27 583 aaPredicted RBP6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 PLD6Q8N2A8 252 aaKnown RBP6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 SLC43A3Q8NBI5 491 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 PSD4Q8NDX1 1056 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 SMPDL3AQ92484 453 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 TMEM106CQ9BVX2 250 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 MTFR1LQ9H019 292 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 NR2E3Q9Y5X4 410 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 TRAPPC13A5PLN9 417 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 TMEM150BA6NC51 233 aa6.02□□□□□ -1.45
PRPF4B-205ENST00000480058 TLR4O00206 839 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms