RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 MAP10Q9P2G4 905 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 NXT1Q9UKK6 140 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 GUCA1BQ9UMX6 200 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 FAM169AQ9Y6X4 670 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 A0A1B0GX78 115 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 A6NL46 340 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 H3BMM5 538 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 NRDCO43847 1150 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 NDUFS3O75489 264 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 MAGP20916 626 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 CD9P21926 228 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 CCR7P32248 378 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 CCNFP41002 786 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 CSE1LP55060 971 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 BASP1P80723 227 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 NADK2Q4G0N4 442 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 C1orf189Q5VU69 101 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 ARMC3Q5W041 872 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 MRNIPQ6NTE8 343 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 OTOAQ7RTW8 1153 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 SDCCAG8Q86SQ7 713 aaPredicted RBP13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 IQCKQ8N0W5 287 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 TTC29Q8NA56 475 aaPredicted RBP13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 OR2L8Q8NGY9 312 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 CFAP61Q8NHU2 1237 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 RAD51AP1Q96B01 352 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 MRM3Q9HC36 420 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 FAM60AQ9NP50 221 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 HOMER3Q9NSC5 361 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 EURLQ9NYK6 297 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 IL1RAPL1Q9NZN1 696 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 SLC2A6Q9UGQ3 507 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 PLAGL1Q9UM63 463 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 MAP4K5Q9Y4K4 846 aa13.91□□□□□ -0.18
SMARCE1-209ENST00000478349 RASGRF2O14827 1237 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 CD3EAPO15446 510 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 GPC4O75487 556 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 KLF7O75840 302 aaPredicted RBP13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 ALBP02768 609 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 CBSLP0DN79 551 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 CBSP35520 551 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 GABRA4P48169 554 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 NPY2RP49146 381 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 SARNPP82979 210 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 CDK16Q00536 496 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 SNX1Q13596 522 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 GRM7Q14831 915 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 MYBPC3Q14896 1274 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 INPP5JQ15735 1006 aaPredicted RBP13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 ZIC1Q15915 447 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 CCNG2Q16589 344 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 DCAF10Q5QP82 559 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 SLC6A19Q695T7 634 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 DRICH1Q6PGQ1 229 aaPredicted RBP13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 GALNT16Q8N428 558 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 DNAJC22Q8N4W6 341 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 SPC24Q8NBT2 197 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 C1orf54Q8WWF1 131 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 NUDT9Q9BW91 350 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 SPRTNQ9H040 489 aaPredicted RBP13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 WDR54Q9H977 334 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 CUEDC1Q9NWM3 386 aaPredicted RBP13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 DHCR7Q9UBM7 475 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 DRG1Q9Y295 367 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 VPS9D1Q9Y2B5 631 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 FLNCQ14315 2725 aa13.9□□□□□ -0.18
SMARCE1-209ENST00000478349 H3BMH7 237 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 SLCO2B1O94956 709 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 PAMP19021 973 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 ALAS2P22557 587 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 GNLYP22749 145 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 RPS3P23396 243 aaKnown RBP eCLIP13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 AOAHP28039 575 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 SESN2P58004 480 aaPredicted RBP13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 SF1Q15637 639 aaKnown RBP13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 FAM214AQ32MH5 1076 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 NAPRTQ6XQN6 538 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 ZNF534Q76KX8 674 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 MCATQ8IVS2 390 aaKnown RBP13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 ZADH2Q8N4Q0 377 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 FLVCR1-AS1Q8TAF5 88 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 COG1Q8WTW3 980 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 ZUFSPQ96AP4 578 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 ILKAPQ9H0C8 392 aaPredicted RBP13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 ATP13A2Q9NQ11 1180 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 P4HTMQ9NXG6 502 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 B3GNT3Q9Y2A9 372 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 NBASA2RRP1 2371 aa13.89□□□□□ -0.19
SMARCE1-209ENST00000478349 BSNQ9UPA5 3926 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 TARM1B6A8C7 271 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 AGPSO00116 658 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 DSCR3O14972 297 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 SRPX2O60687 465 aaPredicted RBP13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 CCDC175P0C221 793 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 ATP5DP30049 168 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 GRIA1P42261 906 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 AIMP2Q13155 320 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 MEI1Q5TIA1 1274 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 MRPL14Q6P1L8 145 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 TTLL10Q6ZVT0 673 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms